Job Description P23538 Confidence 100.00% Date Thu Jan 5 11:39:36 GMT 2012 Rank 10 Aligned Residues 295 % Identity 26% Template d1kbla1 SCOP info TIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Pyruvate phosphate dikinase, C-terminal domain Resolution 1.94

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		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	L	K	V	M	M	N	V	G	N	P	D	R	A	F	D	F	A	C	L	P	N	E	G	V	G	L	A	R	L	E	F	I	I	N	R	M	I	G	V	H	P	R	A	L	L	E	F	D	D	Q	E	P	Q	L	Q	N	E	I	R	E	M	M	K	G	F	D	S	P	R	E	F	Y	V	G	R	L	T	E
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	L	K	V	R	T	N	A	D	T	P	E	D	T	L	N	A	V	K	L	G	A	E	G	I	G	L	C	R	T	E	H	M	F	F	E	A	D	R	I	M	K	I	R	K	M	I	L	S	D	S	V	E	A	R	E	E	A	L	N	E	L	.	.	.	.	.	.	.	.	.	.	.	I	P	F	Q	K	G
Template Known Secondary structure				S								S										T	T			S							T					S															S										T	T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.												.	.	.	.	.	600
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.																			.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	A	T	L	G	A	A	F	Y	P	K	R	V	I	V	R	L	S	D	F	K	S	N	E	Y	A	N	L	V	G	G	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	P	D	E	E	N	P	M	L	G	F	R	G	A	G	R	Y	V	S	D	S	F	R	D	C	F	A
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																																																									.	.
Template Sequence		D	F	K	A	M	Y	K	A	L	E	G	R	P	M	T	V	R	Y	L	D	P	P	L	H	E	F	V	P	H	T	E	E	E	Q	A	E	L	A	K	N	M	G	L	T	L	A	E	V	K	A	K	V	D	E	L	H	E	F	N	P	M	M	G	H	R	G	C	R	L	A	V	.	.	T	Y	P	E	I	A	K
Template Known Secondary structure											T	T										S		G	G	G	G	S			S												T																S		G	G	G	S	S		T						.	.
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.			.	.	.	.	.	.	.
		624	.	.	.	.	.	630	.	.	.	.	.	.	.						.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.						.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.
Predicted Secondary structure																.	.	.	.	.																																			.	.	.	.	.
Query SS confidence																.	.	.	.	.																																			.	.	.	.	.
Query Sequence		L	E	C	E	A	V	K	R	V	R	N	D	M	G	.	.	.	.	.	L	T	N	V	E	I	M	I	P	F	V	R	T	V	D	Q	A	K	A	V	V	E	E	L	A	R	Q	G	L	K	R	G	E	N	.	.	.	.	.	G	L	K	I	I	M	M	C	E	I	P	S	N	A	L	L	A	E	Q	F	L	E
Query Conservation																.	.	.	.	.																																			.	.	.	.	.
Alig confidence																.	.	.	.	.																																			.	.	.	.	.
Template Conservation
Template Sequence		M	Q	T	R	A	V	M	E	A	A	I	E	V	K	E	E	T	G	I	D	I	V	P	E	I	M	I	P	L	V	G	E	K	K	E	L	K	F	V	K	D	V	V	V	E	V	A	E	Q	V	K	K	E	K	G	S	D	M	Q	Y	H	I	G	T	M	I	E	I	P	R	A	A	L	T	A	D	A	I	A	E
Template Known Secondary structure																														S			S																							T													S						T					T	T
Template Predicted Secondary structure
Template SS confidence
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
		694	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.														.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.			.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Query Sequence		Y	F	D	G	F	S	I	G	S	N	D	M	T	Q	L	A	L	G	L	D	R	D	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	S	E	L	F	D	E	R	N	D	A	V	K	A	L	L	S	M	A	I	R	A	A	K	.	.	K	Q	G	K	Y	V	G	I	C	G	Q	G	P	S	D	H
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.																.
Template Conservation																																																																																	.
Template Sequence		E	A	E	F	F	S	F	G	T	N	D	L	T	Q	M	T	F	G	F	S	R	D	D	A	G	K	F	L	D	S	Y	Y	K	A	K	I	Y	E	S	D	P	F	A	R	L	D	Q	T	G	V	G	Q	L	V	E	M	A	V	K	K	G	R	Q	T	R	P	G	L	K	C	G	I	C	G	E	H	G	G	D	.
Template Known Secondary structure		T		S															T																T	T	S		S	S		T	T	T	S			T	T	T																	T	T							S	G	G	G	G	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		759	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.
		759	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	F	A	A	W	L	M	E	E	G	I	D	S	L	S	L	N	P	D	T	V	V	Q	T	W	L	S	L	A	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	S	V	E	F	C	H	K	V	G	L	N	Y	V	S	C	S	P	F	R	V	P	I	A	R	L	A	A	A	Q	A
Template Known Secondary structure											T	T		S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		838	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions