Job Description P23538 Confidence 36.86% Date Thu Jan 5 11:39:36 GMT 2012 Rank 115 Aligned Residues 129 % Identity 16% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.		.	.	.	.	.			700	.
Predicted Secondary structure																																																																								.						.	.
Query SS confidence																																																																								.						.	.
Query Sequence		E	C	E	A	V	K	R	V	R	N	D	M	G	L	T	N	V	E	I	M	I	P	F	V	R	T	V	D	Q	A	K	A	V	V	E	E	L	A	R	Q	G	L	K	R	G	E	N	G	L	K	I	I	M	M	C	E	I	P	S	N	A	L	L	A	E	Q	F	L	E	Y	.	F	D	G	F	S	.	.	I	G
Query Conservation																																																																								.						.	.
Alig confidence																								.															.	.	.	.	.	.	.	.																										.						.	.
Template Conservation																								.															.	.	.	.	.	.	.	.
Template Sequence		K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	P	.	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	.	.	.	.	.	.	.	.	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	M	D	D	A	R	V	A	V	E	T	G	V	D	G	V	D	V	V	I	G
Template Known Secondary structure														T		S							G	.	G	G													.	.	.	.	.	.	.	.	T	S			S	S								S											T	T		S
Template Predicted Secondary structure																								.															.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		702	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.						760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		S	N	D	M	T	Q	L	A	L	G	L	D	R	D	S	G	V	V	S	E	L	F	D	E	R	N	D	A	V	K	A	L	L	S	M	A	I	R	A	A	K	K	Q	G	K	Y	V	G	I	C	G	Q	G	P	S	D	H	E	.	.	.	.	.	D	F	A	A	W	L	M	E	E	G	I	D	S	L	S	L	N
Query Conservation																																																												.	.	.	.	.
Alig confidence								.										.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation								.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	Q	Y	L	R	.	K	Y	S	H	D	M	T	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A
Template Known Secondary structure		G	G	G				.										.	.	.	.	.	.	.	.	.	.	.	.	.														T	T								T	T	G	G	G	S																		S
Template Predicted Secondary structure								.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.		.	.	.	.	.	.	140	.	.														.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions