Job Description P23538 Confidence 27.53% Date Thu Jan 5 11:39:36 GMT 2012 Rank 133 Aligned Residues 62 % Identity 11% Template c3f43A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative anti-sigma factor antagonist tm1081; PDBTitle: crystal structure of a putative anti-sigma factor antagonist (tm1081)2 from thermotoga maritima at 1.59 a resolution Resolution 1.59 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		724	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	R	N	D	A	V	K	A	L	L	S	M	A	I	R	A	A	K	K	Q	G	K	Y	V	G	I	C	G	Q	G	P	S	D	H	E	D	F	A	A	W	L	M	E	E	G	I	D	S	L	S	L	N	P	D	T	V	V	Q	T	W	L	S	L	A	E
Query Conservation
Alig confidence																																.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		E	S	I	D	S	F	S	L	G	V	I	V	N	I	L	K	S	I	S	S	S	G	G	F	F	A	L	V	S	P	.	.	.	.	N	E	K	V	E	R	V	L	S	L	T	N	L	D	R	I	V	K	I	Y	D	T	I	S	E	A	X	E	E	V	R	R
Template Known Secondary structure																							T									.	.	.	.											T	T	G	G	G	T	S				S	S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions