Job Description P23538 Confidence 97.69% Date Thu Jan 5 11:39:36 GMT 2012 Rank 42 Aligned Residues 169 % Identity 12% Template c3cuzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:malate synthase a; PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design Resolution 1.04 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		620	.	.	.	.	.	.	.	.	.	630	.	.		.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.			.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.
Predicted Secondary structure															.																																									.	.																					.	.	.	.
Query SS confidence															.																																									.	.																					.	.	.	.
Query Sequence		D	C	F	A	L	E	C	E	A	V	K	R	V	.	R	N	D	M	G	L	T	N	V	E	I	M	I	P	F	V	R	T	V	D	Q	A	K	A	V	V	E	E	L	A	R	Q	G	L	K	R	G	E	N	G	.	.	L	K	I	I	M	M	C	E	I	P	S	N	A	L	L	A	E	Q	F	L	.	.	.	.
Query Conservation															.																																									.	.																					.	.	.	.
Alig confidence															.																																									.	.																					.	.	.	.
Template Conservation
Template Sequence		S	L	F	D	F	A	L	Y	F	F	H	N	Y	Q	A	L	L	A	K	G	S	G	P	Y	F	Y	L	P	K	T	Q	S	W	Q	E	A	A	W	W	S	E	V	F	S	Y	A	E	D	R	F	N	L	P	R	G	T	I	K	A	T	L	L	I	E	T	L	P	A	V	F	Q	M	D	E	I	L	H	A	L	R
Template Known Secondary structure																				T	T																														T	T			T	T		S								S					T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		693	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720					.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750								.	.	.	.	.	.	.	.	.	760	.
Predicted Secondary structure																														.	.	.	.																															.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.																															.	.	.	.	.	.	.
Query Sequence		E	Y	F	D	G	F	S	I	G	S	N	D	M	T	Q	L	A	L	G	L	D	R	D	S	G	V	V	S	.	.	.	.	E	L	F	D	E	R	N	D	A	V	K	A	L	L	S	M	A	I	R	A	A	K	K	Q	G	K	Y	V	G	I	.	.	.	.	.	.	.	C	G	Q	G	P	S	D	H	E	D	F
Query Conservation																														.	.	.	.																															.	.	.	.	.	.	.
Alig confidence																														.	.	.	.																															.	.	.	.	.	.	.								.
Template Conservation																																																																														.
Template Sequence		D	H	I	V	G	L	N	C	G	R	W	D	Y	I	F	S	Y	I	K	T	L	K	N	Y	P	D	R	V	L	P	D	R	Q	A	V	T	M	D	K	P	F	L	N	A	Y	S	R	L	L	I	K	T	C	H	K	R	G	A	F	A	M	G	G	M	A	A	F	I	P	S	K	D	E	E	H	N	.	N	Q	V
Template Known Secondary structure		T	T								S											T	T	T		G	G	G					G	G	G			T	T	S																	T	T										B				S	S	G	G	G		.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.
		762	.	.	.	.	.								.	.	770	.	.	.	.	.		.	.	.	.	780	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.									.
Query SS confidence								.	.	.	.	.	.	.									.
Query Sequence		A	A	W	L	M	E	.	.	.	.	.	.	.	E	G	I	D	S	L	S	L	.	N	P	D	T	V	V	Q	T	W	L	S	L	A	E
Query Conservation								.	.	.	.	.	.	.									.
Alig confidence								.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		L	N	K	V	K	A	D	K	S	L	E	A	N	N	G	H	D	G	T	W	I	A	H	P	G	L	A	D	T	A	M	A	V	F	N	D
Template Known Secondary structure																T		S					S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions