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Job DescriptionP23538
Confidence99.18%DateThu Jan 5 11:39:36 GMT 2012
Rank27Aligned Residues217
% Identity23%Templatec1sgjB_
PDB info PDB header:lyaseChain: B: PDB Molecule:citrate lyase, beta subunit; PDBTitle: crystal structure of citrate lyase beta subunit
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   482.......490.........500.........510.........520.........530.........540.........550.........560.
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Query Sequence  LPLKVMMNVGNPDRAFDFACLPNEGVGLARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTE
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Template Sequence  LRSVLFAPGNRADLIAKLPRSAPDAVVI. . . . . . . . . . . . . . . . . DLEDAVPGTAEAKAAARPV. . . . . . . . . . . . . AHD
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   8.10.........20.........30..... ....40.........50.... ...
 
   562.......570.........580.........590.........600.........610.........620.........630.........640.
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Query Sequence  GIATLGAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFALECEAVKRVRNDMGLTNV
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Template Sequence  AARDLIAAAPHLAVFVRVNALHSPYFEDDLSVLTPELSG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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TTSTTGGG

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   58.60.........70.........80.........90......
 
   642.......650.........660.........670.........680.........690.... .....700.........710.........
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Query Sequence  EIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIPSNALLAEQFLEY. . FDGFSIGSNDMTQLALGLDRDSGVV
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Template Sequence  . VVVPKLEMGAEARQVAQMLQERSLP. . . . . LPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYT. TDLGGKR. . . . .
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   97..100.........110.........120. ........130.........140.........150....... ..160....
 
   720.........730.........740........ .750.........760. ........770. ........780......
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Query Sequence  SELFDERNDAVKALLSMAIRAAKKQGKYV. . GICGQGPSDHEDF. . . AAWLMEEGID. SLSLNPDTVVQTWLS
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Template Sequence  . . . . TPGGLEVLYARSQVALAARLTGVAALDIVVTALNDP. ETFRADAEQGRALGYSGKLCIHPAQVALAHEY
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   165....170.........180.........190.........200 .........210.........220.........230..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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