Job Description P23538 Confidence 85.30% Date Thu Jan 5 11:39:36 GMT 2012 Rank 66 Aligned Residues 181 % Identity 15% Template c1m6vE_ PDB info PDB header:ligase Chain: E: PDB Molecule:carbamoyl phosphate synthetase large chain; PDBTitle: crystal structure of the g359f (small subunit) point mutant of2 carbamoyl phosphate synthetase Resolution 2.10 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	N	D	V	D	R	V	G	G	K	N	A	S	L	G	E	M	I	T	N	L	S	G	M	G	V	S	V	P	N	G	F	A	T	T	A	D	A	F	N	Q	F	L	D	Q	S	G	V	N	Q	R	I	Y	E	L	L	D	K	T	D	I	D	D	V	T	Q	L	A	K	A	G	A	Q	I	R	Q	W	I	I
Query Conservation
Alig confidence													.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	D	A	I	D	K	A	E	D	R	.	.	.	.	R	R	F	D	V	A	M	K	K	I	G	L	E	T	A	R	S	G	I	A	H	T	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											S		.	.	.	.											T					S					S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	P	F	Q	P	E	L	E	N	A	I	R	E	A	Y	A	Q	L	S	A	D	D	E	N	A	S	F	A	V	R	S	S	A	T	A	E	D	M	P	D	A	S	F	A	G	Q	Q	E	T	F	L	N	V	Q	G	F	D	A	V	L	V	A	V	K	H	V	F	A	S	L	F	N	D	R	A	I	S	Y	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.													.	.	.	.	.											.	.	.	.	.	.	.	.	.											.																				.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.													.	.	.	.	.											.	.	.	.	.	.	.	.	.											.																				.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	E	E	A	L	A	V	A	A	D	V	G	F	.	.	.	.	.	P	C	I	I	R	P	S	F	T	M	.	.	.	.	.	.	.	.	.	G	G	S	G	G	G	I	A	Y	N	.	R	E	E	F	E	E	I	C	A	R	G	L	D	L	S	P	T	K	E	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.												S	.	.	.	.	.	S						T	T			.	.	.	.	.	.	.	.	.	T	T	T	T					S	S	.																T	T			.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.													.	.	.	.	.											.	.	.	.	.	.	.	.	.											.																				.	.	.	.	.
Template SS confidence
											153	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.										.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	Q	G	Y	D	H	R	G	V	A	L	S	A	G	V	Q	R	M	V	R	S	D	L	A	S	S	G	V	M	F	S	I	D	T	E	S	G	F	D	Q	V	V	F	I	T	S	A	W	G	L	G	E	M	V	V	Q	G	A	V	N	P	D	E	F	Y	V	H	K	P	T	L	A	A	N	R	P	A	I	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.																			.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.																			.	.	.															.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	I	D	E	S	L	I	G	W	K	E	Y	E	M	E	V	V	R	.	.	.	.	D	K	N	D	N	C	I	I	V	C	S	I	E	N	F	D	A	M	.	.	.	G	I	H	T	G	D	S	I	T	V	A	P	A	Q	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S										.	.	.	.		T	T												S	S		T	.	.	.	T	S		G	G	G	S					S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.																			.	.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
															204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																																													.	.	.
Query SS confidence																																																													.	.	.
Query Sequence		R	R	T	M	G	S	K	K	I	R	M	V	Y	A	P	T	Q	E	H	G	K	Q	V	K	I	E	D	V	P	Q	E	Q	R	D	I	F	S	L	T	N	E	E	V	Q	E	L	A	K	Q	A	V	Q	I	E	K	H	Y	G	R	.	.	.	P	M	D	I	E	W	A	K	D	G	H	T	G	K	L	F	I	V
Query Conservation																																																													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	T	D	K	E	Y	Q	I	M	R	N	A	S	M	A	V	L	R	E	I	G	V	E	T	G	G	S	N	V	Q	F	A	V	N	P	K	N	G	R	L	I	V	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																					T			S											T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																						255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		334	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	N	P
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions