Return to main results Retrieve Phyre Job Id

Job DescriptionP39297
Confidence3.68%DateThu Jan 5 11:59:03 GMT 2012
Rank77Aligned Residues38
% Identity11%Templated1eaka1
SCOP infoPGBD-like PGBD-like MMP N-terminal domain
Resolution2.66

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50. ........60.........70......
Predicted Secondary structure 









.






Query SS confidence 













.
























Query Sequence  VTDHPQEIRRDQTQ. GLQRIGSVSTMVRGSPDDALAEIKA
Query Conservation   
  
 

   

 . 

 






  


 
    

 
Alig confidence 













.










.












Template Conservation 
    
  
   
  

  



   .         


 
Template Sequence  PGDVAPKTDKELAVQYLNTFYGCPKE. SCNLFVLKDTLKK
Template Known Secondary structure  TT





T


SS.


Template Predicted Secondary structure 













.


Template SS confidence 







































   38.40.........50.........60... ......70......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions