Return to main results Retrieve Phyre Job Id

Job DescriptionP39297
Confidence9.06%DateThu Jan 5 11:59:03 GMT 2012
Rank24Aligned Residues20
% Identity15%Templatec3eikB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:tata-box-binding protein; PDBTitle: double stranded dna binding protein
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70......
Predicted Secondary structure 



Query SS confidence 



















Query Sequence  GSVSTMVRGSPDDALAEIKA
Query Conservation 





  


 
    

 
Alig confidence 



















Template Conservation 









      
   
Template Sequence  GKIVLTGAKVRDDIYQAFNN
Template Known Secondary structure  SSS
Template Predicted Secondary structure 



Template SS confidence 



















   168.170.........180.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions