Job Description A4UR86 Confidence 98.32% Date Thu Jan 5 10:55:12 GMT 2012 Rank 28 Aligned Residues 75 % Identity 21% Template c2pfwB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution Resolution 1.90 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	I	Y	N	K	T	E	S	I	S	G	L	H	Q	H	D	Y	Y	E	F	T	L	V	L	T	G	R	Y	F	Q	E	I	N	G	K	R	V	L	L	E	R	G	D	F	V	F	I	P	L	G	S	H	H	Q	S	F	Y	E	F	G	A	T	R	I	L	N	V	G	I	S	K	R	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	I	W	F	D	K	G	A	E	G	Y	V	H	A	H	R	H	S	Q	V	S	Y	V	V	E	G	E	F	H	V	N	V	D	G	V	I	K	V	L	T	A	G	D	S	F	F	V	P	P	H	V	D	H	G	A	V	C	P	T	G	G	I	L	I	D	T	F	S	P	A	R	E	D	F
Template Known Secondary structure								T	T									S	S																T	T							T	T							T	T								T	T										S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions