Return to main results Retrieve Phyre Job Id

Job DescriptionA4UR86
Confidence87.46%DateThu Jan 5 10:55:12 GMT 2012
Rank285Aligned Residues42
% Identity12%Templatec2lcvA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:hth-type transcriptional repressor cytr; PDBTitle: structure of the cytidine repressor dna-binding domain; an alternate2 calculation
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   190.........200.........210.........220.........230....
Predicted Secondary structure 







Query SS confidence 












































Query Sequence  SALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQL
Query Conservation    
  

     
   
 
 

   
 
   

   

  
  

Alig confidence 





























...











Template Conservation   

 


  



  



 

    

  ...

  
  

  
Template Sequence  ATMKDVALKAKVSTATVSRALMNPDKVSQA. . . TRNRVEKAAREV
Template Known Secondary structure 

TT

TT


SS
...T
Template Predicted Secondary structure 











...
Template SS confidence 












































   10.........20.........30......... 40.........50.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions