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Job DescriptionP32718
Confidence100.00%DateThu Jan 5 11:50:41 GMT 2012
Rank17Aligned Residues213
% Identity21%Templatec3lm2B_
PDB info PDB header:transferaseChain: B: PDB Molecule:putative kinase; PDBTitle: crystal structure of putative kinase. (17743352) from agrobacterium2 tumefaciens str. c58 (dupont) at 1.70 a resolution
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  NVVAGVDMGATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTIIST
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Template Sequence  QTVLAIDIGGSHVKIGLSTDGEERKVE. . . SGKTXTGPEXVAAVTAXAKDX. . . . . . TYDVIAXGYPGPVV. HNKPLREP
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   5....10.........20.........30. ........40.........50.. .......60...... ...70....
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  PNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAGELG
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Template Sequence  VNLGEGWVGYD. . . . . YEGAFGRPVRIVNDALXQAIGSYNGG. . . . . RXLFLGLGTGLGAAXIVENVAQ. . . . . . PXEIA
Template Known Secondary structure  TTS
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   75....80..... ....90.........100.........110. ........120.........130... .....
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  HIPLGDMTQHCACGNPGCLETNCSGMALRRWYEQQPRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAVILG
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Template Sequence  H. . . . . . . . . LPYRKGKTYEHYVSEAYREK. . . . . . . . . . . . . . . . . . . . . KGNAKWQKRVQDVVERLSAALEPDEVVIG
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   139 140.........150......... 160.........170.........180........
 
   246...250.........260.........270.........280.........290.....
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Query Sequence  GGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAIL
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Template Sequence  GGNVERLENLPPKCR. . . . . . . . . . . . . . . . . . . . . RGDNAXAFEGGFRL
Template Known Secondary structure  STTGGG

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   189190.........200... ......210.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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