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Job DescriptionP32718
Confidence100.00%DateThu Jan 5 11:50:41 GMT 2012
Rank3Aligned Residues279
% Identity96%Templatec3htvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:d-allose kinase; PDBTitle: crystal structure of d-allose kinase (np_418508.1) from escherichia2 coli k12 at 1.95 a resolution
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  KQHNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTI
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Template Sequence  KQHNVVAGVDXGATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIGEXIDEQLRRFNARCHGLVXGFPALVSKDKRTI
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SSTTS
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  ISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAG
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Template Sequence  ISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGXGFAVWXNGAPWTGAHGVAG
Template Known Secondary structure 
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  ELGHIPLGDMTQHCACGNPGCLETNCSGMALRRWYEQQPRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAV
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Template Sequence  EETN. . . . . . . . . . . . . . . . . . . . . CSGXALRRWYEQQPRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAV
Template Known Secondary structure 


S.....................SSTTS

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GGGTT


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   163... ...170.........180.........190.........200.........210.........220.
 
   243......250.........260.........270.........280.........290.........300..
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Query Sequence  ILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLP
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Template Sequence  ILGGGVXDXPAFPRETLVAXTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLP
Template Known Secondary structure 
TTTTSTT

TS
TTTTTTT




TT

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   243......250.........260.........270.........280.........290.........300..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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