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Job DescriptionP32718
Confidence98.51%DateThu Jan 5 11:50:41 GMT 2012
Rank76Aligned Residues270
% Identity13%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30...... ...40.........50.........60. ........70.........80
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Query Sequence  VVAGVDMGATHIRFCLRTAEGETLHCEKKR. . . . . TAEVIAPGLVSGIGEMIDEQLRRFN. ARCHGLVMGFPALVSKDKR
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Template Sequence  ICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYKPGINPREAADHHAETFPKLIKEAFEVVDKNEIDLIAFSQ. . . . . . . . .
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   2.......10.........20.........30.........40.........50.........60.........70..
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  TIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGV
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Template Sequence  . . . . GPGLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIGKLTTEAEDPLT. LYVSGGNTQVIAYVSKKYRVFGETL
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   76...80.........90.........100.........110.........120..... ....130.........140.........150
 
   161...... ..170.........180.........190.........200.........210.........220.
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Query Sequence  AGELGHI. . . . . . . . . . . . . . . . . . . PLGDMTQHCACGNPGCLETNCSGMALRRWYEQQPRNYPLRDLFVHAENAPFVQS
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Template Sequence  DIAVGNCLDQFARYVNLPHPGGPYIEELARKGKKLVDLPYTVKGMDIAFSGLLTAAMRAYDAGERLEDICYSLQ. . . . EY
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   151........160.........170.........180.........190.........200.........210.........220.... ..
 
   222.......230.........240.........250.........260.........270.........280.........290.........300.
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Query Sequence  LLENAARAIATSINLFDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFL
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Template Sequence  AFSMLTEITERALAHTNKGEVMLVGGVAAN. NRLREMLKAMCEGQ. . . NVDFYVPPKEFCGD. . . . NGAMIAWLGLLMHK
Template Known Secondary structure  T
SSGGGG
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   227..230.........240.........250...... ...260.........270 .........280.... .....290........
 
   302
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Query Sequence  P
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Template Sequence  N
Template Known Secondary structure  T
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   299
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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