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Job DescriptionP32718
Confidence97.25%DateThu Jan 5 11:50:41 GMT 2012
Rank92Aligned Residues264
% Identity16%Templatec3d2fC_
PDB info PDB header:chaperoneChain: C: PDB Molecule:heat shock protein homolog sse1; PDBTitle: crystal structure of a complex of sse1p and hsp70
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20...
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Query Sequence  VAGVDMGATHIRFCLR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQ
Template Known Secondary structure 

SSTT

TT

SS


SSSTTTT
GGG

TT
BTT
TT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   24.....30.........40 .........50.........60 .........70.........80.........
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Query Sequence  . . . . . . . . . . . TAEGETLHCEKKRTAEV. . IAPGLVSGIGEMIDEQLRRF. NARCHGLVMGFPALVSKDKRTIISTPNLP
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Template Sequence  ESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPP. . . . . . . . . . . . . . . W
Template Known Secondary structure  TT

S
TTSBTT
S



T...............T
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   84.....90.........100.........110.........120.........130.........140....... .
 
   90.........100.........110.........120....... ..130.........140.........150.
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Query Sequence  LTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVEN. . . . . . . . . . . . . . . . . . RLTQQLVLAAYLGTGMGFAVWMNG
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Template Sequence  YTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTAC
Template Known Secondary structure 

TT






SSS


SS
TT
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   149150.........160.........170.........180.........190.........200.........210.........220........
 
   152.......160.........170.........180.........190......... 200.........210.......
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Query Sequence  APWTGAHGVAGELGHIPLGDMTQHCACGNPGCLETNCSGMALRRWYEQ. . . . . . . . . . . . . . QPRNYPLRDLFVHAENAP
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Template Sequence  DKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEE
Template Known Secondary structure  TT
STS

GGG

SSSSSSS

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   229230.........240.........250.........260.........270.........280.........290.........300........
 
   218.220.........230........ .240.........250.........260.........270.........280.........290..
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Query Sequence  FVQSLLENAARAIATSINLFD. . . . . PDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGA
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Template Sequence  LVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTR. . . . . IPTLKQSISEAFGK. . . . . . . PLSTTLNQDEAIAKGA
Template Known Secondary structure  TTTTTTT

GGG

SGGGG.....STS.......


S
TTT
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   309310.........320.........330.........340...... ...350.........360 .........370......
 
   293.....
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Query Sequence  AILAHQ
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Template Sequence  AFICAI
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   377..380..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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