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Job DescriptionP32718
Confidence96.79%DateThu Jan 5 11:50:41 GMT 2012
Rank99Aligned Residues256
% Identity13%Templatec2iirJ_
PDB info PDB header:transferaseChain: J: PDB Molecule:acetate kinase; PDBTitle: acetate kinase from a hypothermophile thermotoga maritima
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30 .........40.........50......... 60..
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Query Sequence  VAGVDMGATHIRFCLRTAEGETL. . . . . . . . . . . . . . . . . . . . . . HCEKKRTAEVIAPGLVSGIGEMIDEQLRR. . . FNA
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Template Sequence  VLVINSGSSSIKYQLIEMEGEKVLCKGIAERIGIEGSRLVHRVGDEKHVIERELPDHEEALKLILNTLVDEKLGVIKDLK
Template Known Secondary structure  TTTTTT
TTSTT
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S
TTT
S
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   63......70.........80...... ...90....... ..100.........110.....
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Query Sequence  RCHGLVMGFPALVSKDKRTIISTP. . . . . . . . NLPLTAADLYD. . . . LADKLENTLNCPVEFSRD. . . . . . . . . . . . . . .
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Template Sequence  EIDAVGHRVVHGGERFKESVLVDEEVLKAIEEVSPLAPLHNPANLMGIKAAMKLLPGVPNVAVFDTAFHQTIPQKAYLYA
Template Known Secondary structure  T

S

TTT
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GGGSTTTSTT

TTGGGGG



S
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   116...120.........130.........140.........150.........160.........170...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . VNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMT
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Template Sequence  IPYEYYEKYKIRRYGFHGTSHRYVSKRAAEILGKKLEELKIITCHIGNGASVAAVKYGKCVDTSMGFTPLEGLVMGTRSG
Template Known Secondary structure  S
T

S


S
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   174.....180 .........190.........200 .........210....... ..220.........230....... .
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Query Sequence  QHCACGN. PGCLETNCSGMALRRWYEQQ. . . . . . . . PRNYPLRDLFVHAENAP. . . . . FVQSLLENAARAIATSINLF. D
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Template Sequence  DLDPAIPFFIMEKEGISPQEMYDILNKKSGVYGLSKGFSSDMRDIEEAALKGDEWCKLVLEIYDYRIAKYIGAYAAAMNG
Template Known Secondary structure  S

TTT

S
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S
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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   239240.........250.........260...
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Query Sequence  PDAVILGGGVMDMPAFPRETLVAMT
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Template Sequence  VDAIVFTAGVGENSPITREDVCSYL
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STT
TT
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   323......330.........340.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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