Return to main results Retrieve Phyre Job Id

Job DescriptionP32718
Confidence98.44%DateThu Jan 5 11:50:41 GMT 2012
Rank77Aligned Residues100
% Identity14%Templatec2cgkB_
PDB info PDB header:transferaseChain: B: PDB Molecule:l-rhamnulose kinase; PDBTitle: crystal structure of l-rhamnulose kinase from escherichia2 coli in an open uncomplexed conformation.
Resolution2.46 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30........ .40.........50.........60.........70.
Predicted Secondary structure 











.............








Query SS confidence 

































. . . . . . . . . . . . .
































Query Sequence  HNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTA. . . . . . . . . . . . . EVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGF
Query Conservation     




 


     
 
  
 

        .............          
   
          
  
 
  
Alig confidence 

































.............






















.








Template Conservation 

  








 

 
 
  
                        
 
       
   
        . 
  
 

 
Template Sequence  FRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAAGI. AIDSIGIDT
Template Known Secondary structure 
SSTTTT



SSS

TT
.


B
Template Predicted Secondary structure 































.


Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.. .......80.
 
   72. ......80.........90.........100.......
Predicted Secondary structure  ....



















Query SS confidence 

. . . .

































Query Sequence  PA. . . . LVSKDKRTIISTPNLPLTAADLYDLADKLENTLN
Query Conservation   
....        
               
   
     
Alig confidence 

....








..






















Template Conservation     
 
  
  
 

..   
 
 
 
       
     
Template Sequence  WGVDFVLLDQQGQRV. . GLPVAYRDSRTNGLMAQAQQQLG
Template Known Secondary structure 
SS

TTS
B
..S

B
TT
STTTTTT
Template Predicted Secondary structure 










..








Template SS confidence 







































   82.......90...... ...100.........110.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions