Job Description P32718 Confidence 99.53% Date Thu Jan 5 11:50:41 GMT 2012 Rank 49 Aligned Residues 232 % Identity 16% Template c1zxoB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:conserved hypothetical protein q8a1p1; PDBTitle: x-ray crystal structure of protein q8a1p1 from bacteroides2 thetaiotaomicron. northeast structural genomics consortium3 target btr25. Resolution 3.20 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		V	A	G	V	D	M	G	A	T	H	I	R	F	C	L	R	T	A	E	G	E	T	L	H	C	E	K	K	R	T	A	E	.	.	V	I	A	P	G	L	V	S	G	I	G	E	M	I	D	E	Q	L	R	R	F	N	A	R	C	H	G	L	V	M	G	F	P	A	L	V	S	K	D	K	R	T	I	I	S	T
Query Conservation																																		.	.
Alig confidence																																		.	.																						.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	I	A	D	S	G	S	T	K	T	D	W	C	V	V	L	N	G	A	V	I	K	R	L	G	T	K	G	I	N	P	F	F	Q	S	E	E	E	I	Q	Q	K	L	T	A	S	L	L	P	Q	L	P	E	G	.	.	K	F	N	A	V	Y	F	Y	G	A	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T								S	S	S	S												T	T	T	S											T	T	T	G	G	G	S		S	S	.	.										T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																								.	.																																																	.	.	.	.	.	.	.	.
Query SS confidence																								.	.																																																	.	.	.	.	.	.	.	.
Query Sequence		P	N	L	P	L	T	A	A	D	L	Y	D	L	A	D	K	L	E	N	T	L	N	.	.	C	P	V	E	F	S	R	D	V	N	L	Q	L	S	W	D	V	V	E	N	R	L	T	Q	Q	L	V	L	A	A	Y	L	G	T	G	M	G	F	A	V	W	M	N	G	A	P	W	T	.	.	.	.	.	.	.	.
Query Conservation																								.	.																																																	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																			.	.																		.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																						.	.	.	.	.
Template Sequence		.	.	.	.	C	T	P	E	K	A	P	V	L	R	R	A	I	A	D	S	L	P	V	I	G	N	I	K	A	N	S	D	X	L	A	A	A	H	G	L	C	.	.	.	.	.	G	Q	K	A	G	I	A	C	I	L	G	T	G	S	N	S	C	F	Y	N	G	K	E	I	V	S	N	I	S	P	L	G	F	I
Template Known Secondary structure		.	.	.	.			T	T	T												S																					.	.	.	.	.	T	T	S								S	S	S								S	S	S
Template Predicted Secondary structure		.	.	.	.																																						.	.	.	.	.
Template SS confidence
						68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
			156	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.																.	.																			.																.	.	.	.
Query SS confidence		.																.	.																			.																.	.	.	.
Query Sequence		.	G	A	H	G	V	A	G	E	L	G	H	I	P	L	G	.	.	D	M	T	Q	H	C	A	C	G	N	P	G	C	L	E	T	N	C	.	S	G	M	A	L	R	R	W	Y	E	Q	Q	P	R	N	.	.	.	.	Y	P	L	R	D	L	F	V	H	A	E	N	A	P	F	V	Q	S	L	L	E	N	A	A
Query Conservation		.																.	.																			.																.	.	.	.
Alig confidence		.																.	.																			.																.	.	.	.
Template Conservation
Template Sequence		L	G	D	E	G	S	G	A	V	L	G	K	L	L	V	G	D	I	L	K	N	Q	L	P	A	T	L	K	E	E	F	L	K	Q	F	D	L	T	P	P	E	I	I	D	R	V	Y	R	Q	P	F	P	N	R	F	L	A	S	L	S	P	F	I	A	Q	H	L	E	E	P	A	I	R	Q	L	V	X	N	S	F
Template Known Secondary structure					T	T	S													T	T	T		S													T												T	S	S									T						T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		228	.	230	.		.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure						.										.	.
Query SS confidence						.										.	.
Query Sequence		R	A	I	A	.	T	S	I	N	L	F	D	P	D	.	.	A	V	I	L	G	G	G	V	M	D	M	P	A	F	P	R	E	T	L	V	A	M
Query Conservation						.										.	.
Alig confidence						.										.	.
Template Conservation
Template Sequence		I	A	F	F	R	R	N	V	X	Q	Y	D	Y	K	Q	Y	P	V	H	F	I	G	S	I	A	Y	C	Y	K	E	I	L	Q	D	A	A	R	Q
Template Known Secondary structure								T	G	G	G	S		G	G	G	S						S						T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions