Job Description P32718 Confidence 99.73% Date Thu Jan 5 11:50:41 GMT 2012 Rank 43 Aligned Residues 276 % Identity 20% Template c1v4sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucokinase isoform 2; PDBTitle: crystal structure of human glucokinase Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.								.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.														.	.	.	.																							.	.
Query SS confidence																											.	.	.	.	.	.	.														.	.	.	.																							.	.
Query Sequence		K	Q	H	N	V	V	A	G	V	D	M	G	A	T	H	I	R	F	C	L	R	T	A	E	G	.	.	.	.	.	.	.	E	T	L	H	C	E	K	K	R	T	A	E	V	.	.	.	.	I	A	P	G	L	V	S	G	I	G	E	M	I	D	E	Q	L	R	R	F	N	A	.	.	R	C	H	G	L	V	M
Query Conservation																											.	.	.	.	.	.	.														.	.	.	.																							.	.
Alig confidence																											.	.	.	.	.	.	.														.	.	.	.																							.	.
Template Conservation
Template Sequence		S	E	V	G	D	F	L	S	L	D	L	G	G	T	N	F	R	V	M	L	V	K	V	G	E	G	E	E	G	Q	W	S	V	K	T	K	H	Q	M	Y	S	I	P	E	D	A	M	T	G	T	A	E	M	L	F	D	Y	I	S	E	C	I	S	D	F	L	D	K	H	Q	M	K	H	K	K	L	P	L	G	F
Template Known Secondary structure													S	S	S													S	S	S															S	T	T	T	S	S	B																		T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.																																		.	.	.	.	.	.	.
Query SS confidence									.	.	.	.																																		.	.	.	.	.	.	.
Query Sequence		G	F	P	A	L	V	S	.	.	.	.	K	D	K	R	T	I	I	S	T	P	N	L	P	L	T	A	A	D	L	Y	D	L	A	D	K	L	E	N	T	L	N	C	P	.	.	.	.	.	.	.	V	E	F	S	R	D	V	N	L	Q	L	S	W	D	V	V	E	N	R	L	T	Q	Q	L	V	L	A	A	Y
Query Conservation									.	.	.	.																																		.	.	.	.	.	.	.
Alig confidence									.	.	.	.																																		.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		T	F	S	F	P	V	R	H	E	D	I	D	K	G	I	L	L	N	W	T	K	G	F	K	A	S	G	A	E	G	N	N	V	V	G	L	L	R	D	A	I	K	R	R	G	D	F	E	M	D	V	V	A	M	V	N	D	T	V	A	T	M	I	S	C	Y	Y	.	.	.	E	D	H	Q	C	E	V	G	M	I
Template Known Secondary structure					S							T	T									T	T				B	T		T	T	S	B										T	T	T		S																					T	.	.	.	T		T	T
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																											.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	T	G	M	G	F	A	V	W	M	N	G	A	P	W	T	G	A	H	G	V	A	G	E	L	G	H	I	P	L	G	D	M	T	Q	H	C	A	C	G	N	P	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	T	N	C	S	G	M	A
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.						.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.						.	.	.	.	.
Template Sequence		V	G	T	G	C	N	A	C	Y	M	E	E	M	Q	N	V	E	L	V	E	G	D	E	.	.	.	G	R	M	C	V	.	.	.	.	.	N	T	E	W	G	A	F	G	D	S	G	E	L	D	E	F	L	L	E	Y	D	R	L	V	D	E	S	S	A	N	P	G	Q	Q	L	Y	E	K	L	I	G	G	K	Y
Template Known Secondary structure			S	S	S									G	G	G		T	T	S	S			S	.	.	.	S					.	.	.	.	.				G	G	G	T	T	T	T	S	T	T	T	T	T											T	S	S	S	T	T	S									T	T	T
Template Predicted Secondary structure																									.	.	.						.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.						.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		193	.	.	.	.	.																						.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.																															.	.	220	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	R	W	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	P	R	N	Y	P	L	R	D	L	F	V	H	A	E	N	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	Q	S
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	G	E	L	V	R	L	V	L	L	R	L	V	D	E	N	L	L	F	H	G	E	A	S	E	Q	L	R	T	R	G	A	F	E	T	R	F	V	S	Q	V	E	S	D	T	G	D	R	K	Q	I	Y	N	I	L	S	T	L	G	L	R	P	S	T	T	D	C	D	I	V	R	R	A	C	E	S	V	S	T	R
Template Known Secondary structure																T	T		S	G	G	G				T	G	G	G	S	T	T		S									T	T			S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240									.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.
Query Sequence		L	L	E	N	A	A	R	A	I	A	T	S	I	N	L	F	D	P	D	.	.	.	.	.	.	.	.	A	V	I	L	G	G	G	V	M	D	M	P	A	F	P	R	E	T	L	V	A	M	T	Q	K	Y	L	R	R	P	L	P	H	Q	V	V	R	F	I	A	A	S	S	S	D	F	N	G	A	Q	G	A	A
Query Conservation																					.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.																												.	.	.	.											.	.	.
Template Conservation																																																								.	.	.	.											.	.	.
Template Sequence		A	A	H	M	C	S	A	G	L	A	G	V	I	N	R	M	R	E	S	R	S	E	D	V	M	R	I	T	V	G	V	D	G	S	V	Y	K	L	H	P	S	F	K	E	R	F	H	A	S	V	R	R	L	T	.	.	.	.	P	S	C	E	I	T	F	I	E	S	.	.	.	E	E	G	S	G	R	G	A	A
Template Known Secondary structure																			T	T			S	S	S															S	T	T														.	.	.	.	T	T									.	.	.	S	S
Template Predicted Secondary structure																																																								.	.	.	.											.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.					.	.	.	.	.	.	.	.	440	.				.	.	.	.	.	.	.	.	450
		294	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		451	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions