Job Description P32718 Confidence 99.74% Date Thu Jan 5 11:50:41 GMT 2012 Rank 40 Aligned Residues 298 % Identity 16% Template c1ig8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:hexokinase pii; PDBTitle: crystal structure of yeast hexokinase pii with the correct2 amino acid sequence Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70
Predicted Secondary structure																												.	.	.													.	.	.	.	.																							.	.	.	.
Query SS confidence																												.	.	.													.	.	.	.	.																							.	.	.	.
Query Sequence		K	Q	H	N	V	V	A	G	V	D	M	G	A	T	H	I	R	F	C	L	R	T	A	E	G	E	.	.	.	T	L	H	C	E	K	K	R	T	A	E	V	.	.	.	.	.	I	A	P	G	L	V	S	G	I	G	E	M	I	D	E	Q	L	R	R	F	N	A	.	.	.	.	R	C	H	G	L	V	M	G
Query Conservation																												.	.	.													.	.	.	.	.																							.	.	.	.
Alig confidence																												.	.	.													.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		K	E	S	G	D	F	L	A	I	D	L	G	G	T	N	L	R	V	V	L	V	K	L	G	G	D	R	T	F	D	T	T	Q	S	K	Y	R	L	P	D	A	M	R	T	T	Q	N	P	D	E	L	W	E	F	I	A	D	S	L	K	A	F	I	D	E	Q	F	P	Q	G	I	S	E	P	I	P	L	G	F	T
Template Known Secondary structure														S	S											S	S	S													T	T	G	G	G		S		T																				T	T				S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		71	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.							.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure								.	.	.	.																																.	.	.	.	.	.
Query SS confidence								.	.	.	.																																.	.	.	.	.	.
Query Sequence		F	P	A	L	V	S	.	.	.	.	K	D	K	R	T	I	I	S	T	P	N	L	P	L	T	A	A	D	L	Y	D	L	A	D	K	L	E	N	T	L	N	.	.	.	.	.	.	C	P	V	E	F	S	R	D	V	N	L	Q	L	S	W	D	V	V	E	N	R	L	T	Q	Q	L	V	L	A	A	Y	L	G
Query Conservation								.	.	.	.																																.	.	.	.	.	.
Alig confidence								.	.	.	.																																.	.	.	.	.	.																				.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		F	S	F	P	A	S	Q	N	K	I	N	E	G	I	L	Q	R	W	T	K	G	F	D	I	P	N	I	E	N	H	D	V	V	P	M	L	Q	K	Q	I	T	K	R	N	I	P	I	E	V	V	A	L	I	N	D	T	T	G	T	L	V	A	S	Y	Y	T	.	.	.	D	P	E	T	K	M	G	V	I	F	G
Template Known Secondary structure				S	S				S	B	T	T									T	T				T	T		T	T	S	B												T	T																							.	.	.		T	T								S
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																										.	.	.	.	.	.	190	.
Predicted Secondary structure																									.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	M	G	F	A	V	W	M	N	G	A	P	W	T	G	A	H	G	V	A	G	E	.	.	.	.	L	G	H	I	P	L	G	D	M	T	Q	H	C	A	C	G	N	P	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	T	N	C	S	G	M
Query Conservation																									.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.							.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		T	G	V	N	G	A	Y	Y	D	V	C	S	D	I	E	K	L	Q	G	K	L	S	D	D	I	P	P	S	A	P	M	A	I	.	.	.	.	.	N	C	E	Y	G	S	F	D	N	E	H	V	V	L	P	R	T	K	Y	D	I	T	I	D	E	E	S	P	R	P	G	Q	Q	T	F	E	K	M	S	S	G	Y
Template Known Secondary structure		S	S									G	G	G		G	G	G	T	T		S		T	T	S		T	T						.	.	.	.	.				G	G	G	T	T	T	T		S	S	S													S	S	S	T	T	S	S								G	G
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.																																																					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		A	L	R	R	W	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	P	R	N	Y	P	L	R	D	L	F	V	H	A	E	.	N	A	P	F
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		Y	L	G	E	I	L	R	L	A	L	M	D	M	Y	K	Q	G	F	I	F	K	N	Q	D	L	S	K	F	D	K	P	F	V	M	D	T	S	Y	P	A	R	I	E	E	D	P	F	E	N	L	E	D	T	D	D	L	F	Q	N	E	F	G	I	N	T	T	V	Q	E	R	K	L	I	R	R	L	S	E	L	I
Template Known Secondary structure		G															T	T	S	S	S	T	T				T	T	T	S	S	T	T	S	S		T											S	T	T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		V	Q	S	L	L	E	N	A	A	R	A	I	A	T	S	I	N	L	F	D	P	D	.	.	A	V	I	L	G	G	G	V	M	D	M	P	A	F	P	R	E	T	L	V	A	M	T	Q	K	Y	L	R	R	P	L	P	H	Q	V	V	R	F	I	A	A	S	S	S	D	F	N	G	A	Q	G	A	A	I	L	A
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		G	A	R	A	A	R	L	S	V	C	G	I	A	A	I	C	Q	K	R	G	Y	K	T	G	H	I	A	A	D	G	S	V	Y	N	R	Y	P	G	F	K	E	K	A	A	N	A	L	K	D	I	Y	G	W	T	Q	T	S	L	D	D	Y	P	I	K	I	V	P	A	E	D	G	S	G	A	G	A	A	V	I	A
Template Known Secondary structure										T											T		S	S							S						S	T	T														T					S	G	G	G		S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	R	F	L	P	Q	F	C	A	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	Q	K	R	I	A	E	G	K	S
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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