Job Description P37647 Confidence 100.00% Date Thu Jan 5 11:56:19 GMT 2012 Rank 9 Aligned Residues 298 % Identity 20% Template d2afba1 SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 2.05

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.								.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		M	S	K	K	I	A	V	I	G	E	C	M	I	E	L	S	E	.	.	.	.	.	.	.	K	G	A	D	V	K	R	G	F	G	G	D	T	L	N	T	S	V	Y	I	A	R	Q	V	D	P	A	A	L	T	V	H	Y	V	T	A	L	G	T	D	S	F	S	Q	Q	M	L	D	A	W	H	G	E	N	V	D
Query Conservation																			.	.	.	.	.	.	.
Alig confidence				.															.	.	.	.	.	.	.																								.	.	.	.
Template Conservation				.																																													.	.	.	.
Template Sequence		H	X	.	K	V	V	T	F	G	E	I	X	L	R	L	S	P	P	D	H	K	R	I	F	Q	T	D	S	F	D	V	T	Y	G	G	A	E	A	N	V	A	A	F	L	A	Q	X	.	.	.	.	G	L	D	A	Y	F	V	T	K	L	P	N	N	P	L	G	D	A	A	A	G	H	L	R	K	F	G	V	K
Template Known Secondary structure				.						S									S	T	T			G	G	G		S																				T	.	.	.	.	T	S										S	S													T	T		B
Template Predicted Secondary structure				.																																													.	.	.	.
Template SS confidence
		0	.		.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	L	T	Q	R	M	E	N	R	L	P	G	L	Y	Y	I	E	T	D	S	T	G	E	R	T	F	Y	Y	W	R	N	E	A	A	A	K	F	W	L	E	S	E	Q	S	A	A	I	C	E	E	L	A	N	F	D	Y	L	Y	L	S	G	I	S	L	A	I	L	S	P	T	S	R	E	K	L	L	S	L	L
Query Conservation
Alig confidence																																															.	.																					.
Template Conservation																																															.	.																					.
Template Sequence		T	D	Y	I	A	R	G	G	N	R	I	G	I	Y	F	L	E	I	G	A	S	Q	R	P	S	K	V	V	Y	D	R	A	H	S	A	I	S	E	A	K	R	E	D	F	D	.	.	W	E	K	I	L	D	G	A	R	W	F	H	F	S	G	I	T	P	P	L	.	G	K	E	L	P	L	I	L	E	D	A	L
Template Known Secondary structure			T	T					S	S											B	T	T	B									T	T		T	T	T	T			G	G	G			.	.					T	T	T								T	T	S	G	G	G	.	S	T	T
Template Predicted Secondary structure																																															.	.																					.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.									.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.
Query Sequence		R	E	C	R	A	N	G	G	K	V	I	F	D	N	N	Y	R	P	R	L	W	A	S	K	E	E	T	Q	Q	V	Y	Q	Q	M	L	E	C	T	D	I	A	F	L	T	L	D	D	E	D	A	L	W	.	.	.	.	.	.	.	.	G	Q	Q	P	V	E	D	V	I	A	R	T	H	N	A	G	V	K	E	V
Query Conservation																																																						.	.	.	.	.	.	.	.
Alig confidence																							.																															.	.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		K	V	A	N	E	K	G	V	T	V	S	C	D	L	N	Y	R	A	R	L	W	.	T	K	E	E	A	Q	K	V	X	I	P	F	X	E	Y	V	D	V	L	I	A	N	E	E	D	I	E	K	V	L	G	I	S	V	E	G	L	N	R	E	A	Y	A	K	I	A	E	E	V	T	R	K	Y	N	F	K	T	V
Template Known Secondary structure								T											T	T	T		.													G	G	G		S																		S																					S
Template Predicted Secondary structure																							.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		V	V	K	R	G	A	D	S	C	L	V	S	I	A	G	E	G	L	V	D	.	.	.	.	V	P	A	V	K	L	P	K	E	K	V	I	D	T	T	A	A	G	D	S	F	S	A	G	Y	L	A	V	R	L	T	G	G	S	A	E	D	A	A	K	R	G	H	L	T	A	S	T	V	I	Q	Y	R	G	A	I
Query Conservation																						.	.	.	.
Alig confidence																						.	.	.	.
Template Conservation
Template Sequence		G	I	T	L	R	E	S	I	S	A	T	V	N	Y	W	S	V	X	V	F	E	N	G	Q	P	H	F	S	N	R	Y	E	I	H	I	V	D	R	V	G	A	G	D	S	F	A	G	A	L	I	Y	G	S	L	X	G	F	D	S	Q	K	K	A	E	F	A	A	A	A	S	C	L	K	H	T	I	P	G	D	F
Template Known Secondary structure									S		S	S											T	T													S			T	T																T																		T	T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
				302	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	I	P	R	E	A	M
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		V	V	L	S	I	E	E	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions