Job Description P37647 Confidence 100.00% Date Thu Jan 5 11:56:19 GMT 2012 Rank 3 Aligned Residues 292 % Identity 16% Template d1bx4a_ SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 1.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20																																	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	I	A	V	I	G	E	C	M	I	E	L	S	E	K	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	K	R	G	F	G	G	D	T	L	N	T	S	V	Y	I	A	R	Q	V	D	P	A	A	L	T	V	H	Y
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	L	F	G	M	G	N	P	L	L	D	I	S	A	V	V	D	K	D	F	L	D	K	Y	S	L	K	P	N	D	Q	I	L	A	E	D	K	H	K	E	L	F	D	E	L	V	K	K	F	K	V	E	Y	H	A	G	G	S	T	Q	N	S	I	K	V	A	Q	W	M	I	Q	Q	P	H	K	A	A	T	F
Template Known Secondary structure		T																								T	T			S	S							G	G	G											S																							S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	L	G	T	D	S	F	S	Q	Q	M	L	D	A	W	H	G	E	N	V	D	T	S	L	T	Q	R	M	E	N	R	L	P	G	L	Y	Y	I	E	T	D	S	T	G	E	R	T	F	Y	Y	W	R	N	E	A	A	A	K	F	W	L	E	S	E	Q	S	A	A	I	C	E	E	L	A	N	F	D	Y
Query Conservation
Alig confidence																														.																											.
Template Conservation																														.																											.
Template Sequence		F	G	C	I	G	I	D	K	F	G	E	I	L	K	R	K	A	A	E	A	H	V	D	A	H	Y	Y	E	.	Q	N	E	Q	P	T	G	T	C	A	A	C	I	T	G	D	N	R	S	L	I	A	N	L	A	A	.	A	N	C	Y	K	K	E	K	H	L	D	L	E	K	N	W	M	L	V	E	K	A	R	V
Template Known Secondary structure							S	S													T	T								.		S	S	S											T	T									G	G	.	G	G	G			G	G	G	T	T	T	S											S
Template Predicted Secondary structure																														.																											.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	L	S	G	I	S	L	A	I	L	S	P	T	S	R	E	K	L	L	S	L	L	R	E	C	R	A	N	G	G	K	V	I	F	D	N	N	Y	R	P	R	L	W	A	S	K	E	E	T	Q	Q	V	Y	Q	Q	M	L	E	C	T	D	I	A	F	L	T	L	D	D	E	D	A	L	W	G	Q	Q	P	V
Query Conservation
Alig confidence															.	.	.	.																								.	.	.	.
Template Conservation															.	.	.	.																								.	.	.	.
Template Sequence		C	Y	I	A	G	F	F	L	T	V	S	P	E	.	.	.	.	S	V	L	K	V	A	H	H	A	S	E	N	N	R	I	F	T	L	N	L	S	A	P	.	.	.	.	F	I	S	Q	F	Y	K	E	S	L	M	K	V	M	P	Y	V	D	I	L	F	G	N	E	T	E	A	A	T	F	A	R	E	Q	G	F
Template Known Secondary structure						G	G	G	G	G	T				.	.	.	.												T	T									S		.	.	.	.						T								G	G	G		S																T	T
Template Predicted Secondary structure															.	.	.	.																								.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		211												.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	.	.	.	.	.	.	.	.	.	.	.	D	V	I	A	R	T	H	N	A	G	V	K	E	V	V	V	K	R	G	A	D	S	C	L	V	S	I	A	G	E	G	L	V	D	V	P	A	V	K	L	P	K	E	K	V	I	D	T	T	A	A	G	D	S	F	S	A	G	Y	L	A	V	R	L	T	G	G	S
Query Conservation			.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation																																													.
Template Sequence		E	T	K	D	I	K	E	I	A	K	K	T	Q	A	L	P	K	M	N	S	K	R	Q	R	I	V	I	F	T	Q	G	R	D	D	T	I	M	A	T	E	S	E	V	.	T	A	F	A	V	L	D	Q	D	Q	K	E	I	I	D	T	N	G	A	G	D	A	F	V	G	G	F	L	S	Q	L	V	S	D	K	P
Template Known Secondary structure															T	S			S		T	T	S									T	T								S	S			.											T	T																				T	T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	A	A	K	R	G	H	L	T	A	S	T	V	I	Q	Y	R	G	A	I	I	P	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	E	C	I	R	A	G	H	Y	A	A	S	I	I	I	R	R	T	G	C	T	F	P	E	K
Template Known Secondary structure																	T	T	S	S	S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions