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Job DescriptionP37647
Confidence100.00%DateThu Jan 5 11:56:19 GMT 2012
Rank1Aligned Residues300
% Identity96%Templatec3lhxA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ketodeoxygluconokinase; PDBTitle: crystal structure of a ketodeoxygluconokinase (kdgk) from2 shigella flexneri
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRME
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Template Sequence  SKKIAVIGECXIELS. . . EDVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQXLDAWHGENVDTSLTQRXE
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S

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   75....80......... 90.........100.........110.........120.........130.........140.........150.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  NRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANGG
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Template Sequence  NRLPGLYYI. . . . ETERTFYYWRNEAAAKFWLASEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGG
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   155....160... ......170.........180.........190.........200.........210.........220.........230
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  KVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAGE
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Template Sequence  KVIFDNNYRPRLWASKEETQQVYQQXLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAGE
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   235....240.........250.........260.........270.........280.........290.........300.........310....
 
   242.......250.........260.........270.........280.........290.........300........
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Query Sequence  GLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAEDAAKRGHLTASTVIQYRGAIIPREAMP
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Template Sequence  ALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYRGAIIPREAXP
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GGG



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   315....320.........330.........340.........350.........360.........370.........380.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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