Job Description P37647 Confidence 100.00% Date Thu Jan 5 11:56:19 GMT 2012 Rank 33 Aligned Residues 270 % Identity 20% Template c3kd6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, pfkb family; PDBTitle: crystal structure of nucleoside kinase from chlorobium tepidum in2 complex with amp Resolution 1.88 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																														.
Query SS confidence																			.																														.
Query Sequence		S	K	K	I	A	V	I	G	E	C	M	I	E	L	S	E	K	.	G	A	D	V	K	R	G	F	G	G	D	T	L	N	T	S	V	Y	I	A	R	Q	V	D	P	A	A	L	T	.	V	H	Y	V	T	A	L	G	T	D	S	F	S	Q	Q	M	L	D	A	W	H	G	E	N	V	D	T	S	L	T	Q	R
Query Conservation																			.																														.
Alig confidence			.	.															.																							.	.	.	.				.											.
Template Conservation			.	.																																						.	.	.	.															.
Template Sequence		S	.	.	L	L	V	I	G	S	L	A	F	D	D	I	E	T	P	F	G	R	S	D	N	T	L	G	G	S	S	T	Y	I	A	L	S	A	S	Y	F	.	.	.	.	T	D	E	P	I	R	X	V	G	V	V	G	S	D	.	F	G	K	E	H	F	D	L	L	H	A	K	N	I	D	T	R	G	I	Q	V
Template Known Secondary structure			.	.					S										S	S																			T	T	T	.	.	.	.		S	S										T	T	.	S											T	T
Template Predicted Secondary structure			.	.																																						.	.	.	.															.
Template SS confidence
		2			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	N	R	L	P	G	L	Y	Y	I	E	T	D	S	T	G	E	R	T	F	Y	Y	W	R	N	E	A	A	A	K	F	W	L	E	S	E	Q	S	A	A	I	C	E	E	L	A	N	F	D	Y	L	Y	L	S	G	I	S	L	A	I	L	S	P	T	S	R	E	K	L	L	S	L	L	R	E	C	R	A	N
Query Conservation
Alig confidence																															.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		I	E	D	G	K	T	F	R	W	A	G	R	Y	H	Y	D	X	N	T	R	D	T	L	D	T	Q	L	N	V	.	.	.	.	.	F	A	E	F	D	P	H	V	P	Q	Y	Y	R	D	S	K	F	V	C	L	G	N	I	D	P	.	.	.	.	.	.	.	.	E	L	Q	L	K	V	L	D	Q	I	D	D	P
Template Known Secondary structure			T	T												T	T	S	S										G	G	.	.	.	.	.	G	T	T							G	G	G	T	T		S						S	S			.	.	.	.	.	.	.	.								T	T		S	S
Template Predicted Secondary structure																															.	.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.									.	130	.	.	.	.	.	.	.	.	.	140	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	K	V	I	F	D	N	N	Y	R	P	R	L	W	A	S	K	E	E	T	Q	Q	V	Y	Q	Q	M	L	E	C	T	D	I	A	F	L	T	L	D	D	E	D	A	L	W	G	Q	Q	P	V	E	D	V	I	A	R	T	H	N	A	G	V	K	E	V	V	V	K	R	G	A	D	S	C	L	V	S	I	A
Query Conservation
Alig confidence																	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.
Template Sequence		K	L	V	V	C	D	T	X	N	F	W	I	E	G	K	.	.	.	.	.	.	P	E	E	L	K	K	V	L	A	R	V	D	V	F	I	V	N	D	S	E	A	R	L	L	S	G	D	P	N	L	V	K	T	A	R	I	I	R	E	X	G	P	K	T	L	I	I	K	K	G	E	H	G	A	L	L	F	T	D
Template Known Secondary structure		S															.	.	.	.	.	.									T	T		S														S		S											T	T	S		S							T	T	S							T
Template Predicted Secondary structure																	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		G	E	G	L	V	D	V	P	A	V	K	L	P	K	E	K	V	I	D	T	T	A	A	G	D	S	F	S	A	G	Y	L	A	V	R	L	T	G	G	S	A	.	.	.	.	.	E	D	A	A	K	R	G	H	L	T	A	S	T	V	I	Q	Y	R	G	A
Query Conservation																																											.	.	.	.	.
Alig confidence					.	.	.																																				.	.	.	.	.
Template Conservation					.	.	.
Template Sequence		N	G	I	.	.	.	F	A	A	P	A	F	P	L	E	S	I	Y	D	P	T	G	A	G	D	T	F	A	G	G	F	I	G	H	L	A	R	C	G	N	T	S	E	A	E	X	R	K	A	V	L	Y	G	S	A	X	A	S	F	C	V	E	Q	F	G	P
Template Known Secondary structure		T			.	.	.							T	T				S			T	T																				S																			T	T	S	S	T	T
Template Predicted Secondary structure					.	.	.
Template SS confidence
		216	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions