Job Description P37647 Confidence 100.00% Date Thu Jan 5 11:56:19 GMT 2012 Rank 27 Aligned Residues 259 % Identity 20% Template c3go6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribokinase rbsk; PDBTitle: crystal structure of m. tuberculosis ribokinase (rv2436) in2 complex with ribose and amp-pnp Resolution 1.98 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.													.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	K	I	A	V	I	G	E	C	M	I	E	L	S	E	K	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	V	K	R	G	F	G	G	D	T	L	N	T	S	V	Y	I	A	R	Q	V	D	P	A	A	L	T	V	H	Y	V	T	A	L	G	T	D	S	F	S	Q	Q	M	L	D	A	W	H	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		A	P	R	V	C	V	V	G	S	V	N	M	D	L	T	F	V	V	D	A	L	P	R	P	G	E	T	V	L	A	A	S	L	T	R	T	P	G	G	K	G	A	N	Q	A	V	A	A	A	R	A	.	.	.	.	G	A	Q	V	Q	F	S	G	A	F	G	D	D	P	A	A	A	Q	L	R	A	H	L	R	A
Template Known Secondary structure																				S	S				T	T						S																				T	.	.	.	.	T											S	S
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	V	D	T	S	L	T	Q	R	M	E	N	R	L	P	G	L	Y	Y	I	E	T	D	S	T	G	E	R	T	F	Y	Y	W	R	N	E	A	A	A	K	F	W	L	E	S	E	Q	S	A	A	I	C	E	E	L	A	N	F	D	Y	L	Y	L	S	G	I	S	L	A	I	L	S	P	T	S	R	E	K	L
Query Conservation
Alig confidence																		.																				.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation																		.																				.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Sequence		N	A	V	G	L	D	R	T	V	T	V	P	G	P	S	G	.	T	A	I	I	V	V	D	A	S	A	E	N	T	V	L	V	A	P	G	.	.	.	.	.	.	.	.	A	N	A	H	L	T	P	V	P	S	A	V	A	N	C	D	V	L	L	T	Q	L	E	I	P	V	A	.	.	.	.	.	.	.	T	A
Template Known Secondary structure		T	T		B		T	T					S	S				.								T	T										G	.	.	.	.	.	.	.	.	G	G	G	G					G	G	G	G	T	T		S						S	S	S				.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																				.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	L	L	R	E	C	R	A	N	G	G	K	V	I	F	D	N	N	Y	R	P	R	L	W	A	S	K	E	E	T	Q	Q	V	Y	Q	Q	M	L	E	C	T	D	I	A	F	L	T	L	D	D	E	D	A	L	W	G	Q	Q	P	V	E	D	V	I	A	R	T	H	N	A	G	V	K	E	V	V	V	K	R
Query Conservation
Alig confidence																										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	A	A	R	A	A	Q	S	A	D	A	V	V	M	V	N	A	S	P	A	G	Q	D	.	.	.	.	.	.	.	R	S	S	L	Q	D	L	A	A	I	A	D	V	V	I	A	N	E	H	E	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	P	S	P	P	T	H	F	V	I	T	L
Template Known Secondary structure											T	T									S	S				.	.	.	.	.	.	.	T	G	G	G								S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S	S			S
Template Predicted Secondary structure																										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.								.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.															.	200	.	.	.	.	.	.	.	.	.	210	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.					280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		G	A	D	S	C	L	V	S	I	A	G	E	G	L	V	D	V	P	A	V	K	L	P	K	E	K	V	I	D	T	T	A	A	G	D	S	F	S	A	G	Y	L	A	V	R	L	T	G	G	S	.	.	.	.	A	E	D	A	A	K	R	G	H	L	T	A	S	T	V	I	Q	Y	R	G	A	I	I	P	R	E
Query Conservation																																																				.	.	.	.
Alig confidence														.	.	.	.																																			.	.	.	.																					.	.	.
Template Conservation														.	.	.	.																																																											.	.	.
Template Sequence		G	V	R	G	A	R	Y	V	G	A	D	G	.	.	.	.	V	F	E	V	P	A	P	T	V	T	P	V	D	T	A	G	A	G	D	V	F	A	G	V	L	A	A	N	W	P	R	N	P	G	S	P	A	E	R	L	R	A	L	R	R	A	C	A	A	G	A	L	A	T	L	V	S	G	.	.	.	V	G	D
Template Known Secondary structure		G	G	G							T	T		.	.	.	.												S			T	T													S			T	T																					T	T	S	S	S	.	.	.	S	S	S
Template Predicted Secondary structure														.	.	.	.																																																											.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.
		306	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	A	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		285	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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