Job Description P37647 Confidence 98.15% Date Thu Jan 5 11:56:19 GMT 2012 Rank 60 Aligned Residues 243 % Identity 14% Template c3drwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:adp-specific phosphofructokinase; PDBTitle: crystal structure of a phosphofructokinase from pyrococcus2 horikoshii ot3 with amp Resolution 1.90 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																						.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	G	F	G	G	D	T	L	N	T	S	V	Y	I	A	R	Q	V	D	P	A	A	L	T	V	H	Y	V	T	A	L	G	T	D	S	F	S	Q	Q	M	L	D	A	W	H	G	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	T	S	L	T	Q	R	M	E
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.										.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.										.	.	.
Template Sequence		E	E	R	L	G	G	Q	A	G	I	I	A	N	T	L	A	G	L	.	.	.	.	K	I	R	K	V	I	A	Y	T	.	.	.	P	F	L	P	K	R	L	A	E	L	F	K	K	G	V	L	Y	P	V	V	E	N	G	E	L	Q	F	K	P	I	Q	E	A	Y	R	E	G	D	P	L	K	I	N	R	I	F
Template Known Secondary structure							S												T	.	.	.	.	T		S							.	.	.	S								T	T	S		T	T							S	S	S	S						G	G	G				T	T
Template Predicted Secondary structure																				.	.	.	.										.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		82	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.																																																							.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.																																																							.	.	.	.	.	.	.
Query Sequence		N	R	L	P	G	L	Y	Y	.	.	.	.	.	I	E	T	D	S	T	G	E	R	T	F	Y	Y	W	R	N	E	A	A	A	K	F	W	L	E	S	E	Q	S	A	A	I	C	E	E	L	A	N	F	D	Y	L	Y	L	S	G	I	S	L	A	I	L	S	P	.	.	.	.	.	.	.	T	S	R	E	K	L
Query Conservation										.	.	.	.	.																																																							.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.																																																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	R	K	G	L	K	F	K	L	G	D	E	T	I	E	I	P	N	S	G	R	F	I	V	S	A	R	F	E	S	I	S	R	I	E	T	R	E	D	I	K	P	F	L	G	E	I	G	K	E	V	D	G	A	I	F	S	G	Y	Q	G	L	R	T	K	Y	S	D	G	K	D	A	N	Y	Y	L	R	R	A
Template Known Secondary structure					T	T					S	S	S							S											S	G	G	G			S			T	T	T	G	G	G									S							G	G	G			S	B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																		.	.	210	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	L	L	R	E	C	R	A	N	G	G	K	V	I	F	D	N	N	Y	R	P	R	L	W	A	S	K	E	E	T	Q	Q	V	Y	Q	Q	M	L	E	C	T	D	I	A	F	L	T	L	D	D	E	D	A	L	W	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	V	E	D
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		K	E	D	I	I	E	F	K	E	K	D	V	K	I	H	V	E	F	A	S	V	.	.	.	.	Q	D	R	K	L	R	K	K	I	I	T	N	I	L	P	F	V	D	S	V	G	I	D	E	A	E	I	A	Q	I	L	S	V	L	G	Y	R	E	L	A	D	R	I	F	T	Y	N	R	L	E	D	S	I	L	G
Template Known Secondary structure											T	T											.	.	.	.	S												T	G	G	G	S	S																	T
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	A	R	T	H	N	A	G	V	K	E	V	V	V	K	R	G	A	D	S	C	L	V	S	I	A	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	M	I	I	L	D	E	L	N	F	E	I	L	Q	V	H	T	T	Y	Y	L	M	Y	I	T	H	R	D	N	P	L	S	E	E	E	L	A	K	S	L	E	F	G	T	T	L	A	A	A	R	A	S	L	G	D	I	R	G	P	D	D	Y	K	V	G	L	K	V	P	F	N	E	R	S	E	Y	V	K	L	R
Template Known Secondary structure												S							S	S								T	T		S	S																							S	S			S	G	G	G						T	S				T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
														243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	L	V	D	V	P	A	V	K	L	P	K	E	K	V	I	D	T	T	A	A	G	D	S	F	S	A	G	Y	L	A	V	R	L	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	E	A	K	S	R	L	R	M	R	E	Y	K	V	V	V	I	P	T	R	L	V	Q	N	P	V	L	T	V	G	L	G	D	T	I	S	A	G	A	F	L	T	Y	L	E
Template Known Secondary structure									S			T	T												S	S		S			T	T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions