Job Description P37647 Confidence 100.00% Date Thu Jan 5 11:56:19 GMT 2012 Rank 43 Aligned Residues 248 % Identity 20% Template c3bf5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribokinase related protein; PDBTitle: crystal structure of putative ribokinase (10640157) from thermoplasma2 acidophilum at 1.91 a resolution Resolution 1.91 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.												.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	I	A	V	I	G	E	C	M	I	E	L	S	.	.	.	.	.	.	.	.	.	.	.	E	K	G	A	D	V	K	R	G	F	G	G	D	T	L	N	T	S	V	Y	I	A	R	Q	V	D	P	A	A	L	T	V	H	Y	V	T	A	L	G	T	D	S	F	S	Q	Q	M	L	D	A	W	H	G	E	N
Query Conservation																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.																				.
Template Conservation																																																			.	.	.	.																				.
Template Sequence		R	F	L	A	Y	F	G	H	L	N	I	D	V	L	I	S	V	D	S	I	P	R	E	G	S	V	N	V	K	D	L	R	P	R	F	G	G	T	A	G	N	F	A	I	V	A	Q	K	F	.	.	.	.	R	I	P	F	D	L	Y	S	A	V	G	X	K	T	H	R	E	Y	L	.	A	X	I	E	S	X	G
Template Known Secondary structure																			S				S	S	S					S																				T	.	.	.	.	T											T	T	T						.						T	T
Template Predicted Secondary structure																																																			.	.	.	.																				.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	T	S	L	T	Q	R	M	E	N	R	L	P	G	L	Y	Y	I	E	T	D	S	T	G	E	R	T	F	Y	Y	W	R	N	E	A	A	A	K	F	W	L	E	S	E	Q	S	A	A	I	C	E	E	L	A	N	F	D	Y	L	Y	L	S	G	I	S	L	A	I	L	S	P	T	S	R	E	K	L	L	S
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	N	T	G	H	V	E	K	F	E	D	E	S	G	P	I	C	Y	I	A	T	D	G	K	K	Q	V	S	F	X	H	Q	.	.	.	.	.	.	.	.	.	.	.	G	A	X	A	A	W	A	P	Q	L	A	D	E	Y	E	Y	V	H	F	S	T	G	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T					T	T				S								S	S									.	.	.	.	.	.	.	.	.	.	.	T											S									S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.												.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	R	E	C	R	A	N	G	G	K	V	I	F	D	N	N	Y	R	P	R	L	W	A	S	K	E	E	T	Q	Q	V	Y	Q	Q	M	L	E	C	T	D	I	A	F	L	T	L	D	D	E	D	A	L	W	G	Q	Q	P	V	E	D	V	I	A	R	T	H	N	A	G	V	K	E	V	V	V	K	R	G	A
Query Conservation
Alig confidence																										.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Sequence		Y	L	D	X	A	K	S	I	R	S	K	I	I	F	D	P	S	Q	E	I	H	K	Y	S	.	.	.	.	.	K	D	E	L	K	K	F	H	E	I	S	Y	X	S	I	F	N	D	H	E	Y	R	V	F	.	.	.	.	.	.	.	.	R	E	X	T	G	L	S	S	P	K	V	T	T	I	V	T	N	G	E
Template Known Secondary structure											S							G	G	G	G	G	G	S		.	.	.	.	.												S													.	.	.	.	.	.	.	.							S	S		S	S							G	G
Template Predicted Secondary structure																										.	.	.	.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180									.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	C	L	V	S	I	A	G	E	G	L	V	D	V	P	A	V	K	L	P	K	E	K	V	I	D	T	T	A	A	G	D	S	F	S	A	G	Y	L	A	V	R	L	T	G	G	S	A	E	D	A	A	K	R	G	H	L	T	A	S	T	V	I	Q	Y
Query Conservation
Alig confidence																				.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		R	G	S	S	L	F	X	D	G	K	K	Y	D	F	P	A	I	P	.	.	.	.	.	S	S	G	D	T	V	G	A	G	D	S	F	R	A	G	L	Y	L	A	L	Y	N	R	R	S	I	E	K	G	X	I	Y	G	T	I	I	A	H	H	V	I	D	D
Template Known Secondary structure		G							T	T										.	.	.	.	.			S			T	T															T	T
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.						.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions