Job Description P37647 Confidence 100.00% Date Thu Jan 5 11:56:19 GMT 2012 Rank 24 Aligned Residues 270 % Identity 16% Template c3b1qD_ PDB info PDB header:transferase Chain: D: PDB Molecule:ribokinase, putative; PDBTitle: structure of burkholderia thailandensis nucleoside kinase (bthnk) in2 complex with inosine Resolution 1.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.											20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	V	I	G	E	C	M	I	E	L	S	E	K	G	.	.	.	.	.	.	.	.	.	.	A	D	V	K	R	G	F	G	G	D	T	L	N	T	S	V	Y	I	A	R	Q	V	D	P	A	A	L	T	V	H	Y	V	T	A	L	G	T	D	S	F	S	Q	Q	M	L	D	A	W	H	G	E	N	V	D	T
Query Conservation																	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																						.	.	.	.														.
Template Conservation																																																.	.	.	.														.
Template Sequence		T	L	I	C	G	S	I	A	Y	D	N	I	M	T	F	E	G	R	F	N	L	S	F	L	V	P	T	M	R	R	E	F	G	G	C	A	G	N	I	A	Y	A	L	N	L	L	.	.	.	.	G	G	D	A	R	M	M	G	T	L	G	A	V	.	D	A	Q	P	Y	L	D	R	M	D	A	L	G	L	S	R
Template Known Secondary structure						S											S	S																														.	.	.	.	T											T	T	.	T												T
Template Predicted Secondary structure																																																.	.	.	.														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	Q	R	M	E	N	R	L	P	G	L	Y	Y	I	E	T	D	S	T	G	E	R	T	F	Y	Y	W	R	N	E	A	A	A	K	F	W	L	E	S	E	Q	S	A	A	I	C	E	E	L	A	N	F	D	Y	L	Y	L	S	G	I	S	L	A	I	L	S	P	T	S	R	E	K	L	L	S	L	L	R
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Sequence		E	Y	V	R	V	L	P	D	T	Y	S	A	Q	A	M	I	T	T	D	L	D	N	N	Q	I	T	A	F	H	P	G	A	M	.	.	.	.	.	.	.	M	Q	S	H	V	N	H	A	G	E	A	K	D	I	K	L	A	I	V	G	P	D	G	F	.	.	.	.	.	.	.	.	Q	G	M	V	Q	H	T	E
Template Known Secondary structure								T	T												T	T										G	G	G	.	.	.	.	.	.	.	G	G	G	G	G	S		G	G	G			S		S						S				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.								.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.									.	.	.	150	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	R	A	N	G	G	K	V	I	F	D	N	N	Y	R	P	R	L	W	A	S	K	E	E	T	Q	Q	V	Y	Q	Q	M	L	E	C	T	D	I	A	F	L	T	L	D	D	E	D	A	L	W	G	Q	Q	P	V	E	D	V	I	A	R	T	H	N	A	G	V	K	E	V	V	V	K	R	G	A	D	S	C
Query Conservation
Alig confidence																							.	.	.	.	.																																	.	.	.
Template Conservation																							.	.	.	.	.																																	.	.	.
Template Sequence		E	L	A	Q	A	G	V	P	F	I	F	D	P	G	Q	G	L	P	L	F	D	.	.	.	.	.	G	A	T	L	R	R	S	I	E	L	A	T	Y	I	A	V	N	D	Y	E	A	K	L	V	C	D	K	T	G	W	S	E	.	.	.	D	E	I	A	S	R	V	Q	A	L	I	I	T	R	G	E	H	G	A
Template Known Secondary structure							T								G	G	G	G	G	G			.	.	.	.	.												S																					.	.	.					T	T	S	S							G	G	G
Template Predicted Secondary structure																							.	.	.	.	.																																	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	S	I	A	G	E	G	L	V	D	V	P	A	V	K	L	P	K	E	K	V	I	D	T	T	A	A	G	D	S	F	S	A	G	Y	L	A	V	R	L	T	G	G	S	A	E	D	A	A	K	R	G	H	L	T	A	S	T	V	I	Q	Y	R	G	A	I	I	P	R	E	A	M	P
Query Conservation
Alig confidence										.	.	.																																																							.	.	.
Template Conservation										.	.	.																																																							.	.	.
Template Sequence		T	I	R	H	R	D	G	T	.	.	.	E	Q	I	P	A	V	R	A	E	R	V	I	D	P	T	G	C	G	D	A	F	R	G	G	L	L	Y	G	I	E	H	G	F	D	W	A	T	A	G	R	L	A	S	L	M	G	A	L	K	I	A	H	Q	G	.	.	.	P	Q	T	Y	A	P
Template Known Secondary structure						T	T			.	.	.									S						T	T															T	T																			T	S	S	S	.	.	.	S	S
Template Predicted Secondary structure										.	.	.																																																							.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions