Job Description P37647 Confidence 100.00% Date Thu Jan 5 11:56:19 GMT 2012 Rank 20 Aligned Residues 276 % Identity 22% Template c2nwhA_ PDB info PDB header:signaling protein,transferase Chain: A: PDB Molecule:carbohydrate kinase; PDBTitle: carbohydrate kinase from agrobacterium tumefaciens Resolution 1.86 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.												.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	K	K	I	A	V	I	G	E	C	M	I	E	L	S	.	.	.	.	.	.	.	.	.	.	.	E	K	G	A	D	V	K	R	G	F	G	G	D	T	L	N	T	S	V	Y	I	A	R	Q	V	D	P	A	A	L	T	V	H	Y	V	T	A	L	G	T	D	S	F	S	Q	Q	M	L	D	A	W	H	G
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.														.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation				.																																																	.	.	.	.
Template Sequence		M	K	.	K	I	L	V	L	G	G	A	H	I	D	R	R	G	M	I	E	T	E	T	A	P	G	A	S	N	P	G	S	W	M	E	E	A	G	G	G	G	F	N	A	A	R	N	L	S	R	L	.	.	.	.	G	F	E	V	R	I	I	A	P	R	G	G	D	V	T	G	E	V	V	A	E	A	A	R	Q
Template Known Secondary structure				.						S											S	S	S			T	T	S																								T	.	.	.	.	T											S	S
Template Predicted Secondary structure				.																																																	.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	V	D	T	S	L	T	Q	R	M	E	N	R	L	P	G	L	Y	Y	I	E	T	D	S	T	G	E	R	T	F	Y	Y	W	R	N	E	A	A	A	K	F	W	L	E	S	E	Q	S	A	A	I	C	E	E	L	A	N	F	D	Y	L	Y	L	S	G	I	S	L	A	I	L	S	P	T	S	R	E	K	L
Query Conservation
Alig confidence													.																																																						.	.	.	.	.	.	.
Template Conservation													.																																																						.	.	.	.	.	.	.
Template Sequence		A	G	V	E	D	T	P	F	T	F	L	.	D	R	R	T	P	S	Y	T	A	I	L	E	R	D	G	N	L	V	I	A	L	A	D	M	D	L	Y	K	L	F	T	P	R	R	L	K	V	R	A	V	R	E	A	I	I	A	S	D	F	L	L	C	D	.	.	.	.	.	.	.	A	N	L	P	E	D	T	L
Template Known Secondary structure		T	T									T	.	T	S											T	T	S										G	G	G	G	G							T	S											S						.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure													.																																																						.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.								140	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	L	L	R	E	C	R	A	N	G	G	K	V	I	F	D	N	N	Y	R	P	R	L	W	A	S	K	E	E	T	Q	Q	V	Y	Q	Q	M	L	E	C	T	D	I	A	F	L	T	L	D	D	E	D	A	L	W	G	Q	Q	P	V	E	D	V	I	A	R	T	H	N	A	G	V	K	E	V	V	V	K	R
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.																																				.	.	.
Template Conservation																			.	.	.	.	.	.	.	.																																				.	.	.
Template Sequence		T	A	L	G	L	I	A	R	A	C	E	K	P	L	A	A	I	.	.	.	.	.	.	.	.	A	I	S	P	A	K	A	V	K	L	K	A	A	L	G	D	I	D	I	L	F	M	N	E	A	E	A	R	A	L	T	G	V	R	D	.	.	.	W	P	N	I	L	R	K	A	G	L	S	G	G	V	V	T	R
Template Known Secondary structure											T	T							.	.	.	.	.	.	.	.			S					G	G	G	T	T	T	G	G	G		S																T	T	.	.	.								T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.																																				.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.									.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	S	C	L	V	S	I	A	G	E	G	L	V	D	V	P	A	V	K	L	P	K	E	K	V	I	D	T	T	A	A	G	D	S	F	S	A	G	Y	L	A	V	R	L	T	G	G	S	A	E	D	A	A	K	R	G	H	L	T	A	S	T	V	I	Q	Y	R	G	A	I	I	P
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		G	A	S	E	V	V	A	F	N	G	T	E	K	A	I	L	H	P	P	L	I	R	.	.	.	E	V	K	D	V	T	G	A	G	D	A	M	A	S	G	Y	L	A	A	I	A	E	G	K	T	I	R	E	A	L	R	Q	G	A	A	A	A	A	I	T	V	Q	S	S	F	A	T	S	Q
Template Known Secondary structure		T	T	T							S	S										S	S	.	.	.	S		S					S	S													T	T																			S	S	T	T			G	G
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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