Job Description P37647 Confidence 75.92% Date Thu Jan 5 11:56:19 GMT 2012 Rank 70 Aligned Residues 86 % Identity 19% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		K	K	I	A	V	I	G	E	C	M	I	E	L	S	E	K	G	A	D	V	K	R	G	F	G	G	D	T	L	N	T	.	S	V	Y	I	A	R	Q	V	D	P	A	A	L	T	V	H	Y	V	T	A	L	G	T	D	S	F	S	Q	Q	M	L	D	A	W	H	G	E	N	V	D	T	S	L	T	Q	R	M	E
Query Conservation																																	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.								.	.	.	.						.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.						.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		R	H	I	H	F	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	G	A	G	X	G	G	I	A	E	V	L	A	N	E	.	.	.	.	G	Y	Q	I	S	.	.	.	.	.	G	S	D	L	A	P	N	P	V	T	Q	Q	L	X	N	L	G	A	T	I	.	.	.	.	.	.	.
Template Known Secondary structure								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	T	T											T	.	.	.	.	T					.	.	.	.	.				S	S											T	T				.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.						.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.																	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.						.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	L	P	G	L	Y	Y	I	E	T	D	S	T	G	E	R	T	F	Y	Y	W	R	N	E	A	A	A	K	F	W	L	E	S	E	Q	S	A	A	I	C	E	E	L	A	N	F	D	Y	L	Y	L	S	G	I	S	L	A	I	L	S	P	T	S	R	E	K	L	L	S	L	L	R	E	C	R	A	N	G	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	F	N	H	R	P	E	N	V	R	D	A	S	V	V	V	V	S	S	A	I	S	A	D	N	P	E	.	.	.	.	.	.	.	.	.	I	V	A	A	H	E	A	R	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			G	G	G	G	T	T		S						T	T			T	T				.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.
Template SS confidence
																																					68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.										.	.	.	.	.	100	.	.	.
		162	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		104	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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