Job Description P67430 Confidence 99.75% Date Thu Jan 5 12:10:35 GMT 2012 Rank 100 Aligned Residues 169 % Identity 12% Template c3kkcB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:tetr family transcriptional regulator; PDBTitle: the crystal structure of tetr transcriptional regulator from2 streptococcus agalactiae 2603v Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	E	H	D	T	R	E	H	L	L	A	T	G	E	Q	L	C	L	Q	R	G	F	T	G	M	G	L	S	E	L	L	K	T	A	E	V	P	K	G	S	F	Y	H	Y	F	R	S	K	E	A	F	G	V	A	M	L	E	R	H	Y	A	A	Y	H	Q	R	L	T	E	L	L	Q	S	G	E	G	N	Y	R
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		R	Q	I	Q	K	T	K	V	A	I	Y	N	A	F	I	S	L	L	Q	E	N	D	Y	S	K	I	T	V	Q	D	V	I	G	L	A	N	V	G	R	S	T	F	Y	S	H	Y	E	S	K	E	V	L	L	K	E	L	C	E	D	L	F	H	H	L	.	.	.	.	.	.	F	K	Q	G	R	D	V	T	F	E
Template Known Secondary structure																				T	S	S		G	G	G											T											S	S																	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	I	L	A	Y	Y	Q	Q	T	L	N	Q	F	C	Q	H	G	T	I	S	G	C	L	T	V	K	L	S	A	E	V	C	D	L	S	E	D	M	R	S	A	M	D	K	G	A	R	G	V	I	A	L	L	S	Q	A	L	E	N	G	R	E	N	H	C	L	T	F	C	G	E	P	L	Q	Q	A	Q	V	L
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	L	V	H	I	L	K	H	F	E	Q	N	Q	D	S	I	A	T	L	L	L	S	D	D	P	Y	F	L	L	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	E	L	E	H	D	V	Y	P	R	L	R	E	E	Y	I	T	K	V	D	I	P	E	D	F	L	K	Q	F	L
Template Known Secondary structure														T	T	T	S								T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T												T	T	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	L	W	L	G	A	N	L	Q	A	K	I	S	R	S	F	E	P	L	E	N	A	L	A	H	V	K	N	I	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	S	F	I	E	T	L	K	W	W	L	H	Q	R	Q	K	X	T	V	E	D	L	L	K	Y	Y	L	T	X	V	E
Template Known Secondary structure														T		T	T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions