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Job Description | P67430 | Confidence | 67.00% | Date | Thu Jan 5 12:10:35 GMT 2012 |
Rank | 325 | Aligned Residues | 88 |
% Identity | 6% | Template | c3ivpD_ |
PDB info |
PDB header:dna binding protein | Chain: D: PDB Molecule:putative transposon-related dna-binding protein; |
PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630.
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Resolution | 2.02 Å |
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28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | M | G | L | S | E | L | L | K | T | A | E | V | P | K | G | S | F | Y | H | Y | F | R | S | K | E | A | F | G | V | A | M | L | E | R | H | Y | A | A | Y | H | Q | R | L | T | E | L | L | Q | S | G | E | G | N | Y | R | D | R | I | L | A | Y | Y | Q | Q | T | L | N | Q | F | C | Q | H | G | T | I | S | G | C | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | L | T | R | E | Q | V | G | A | X | I | E | I | D | P | R | Y | L | T | N | I | E | N | K | G | Q | H | P | S | L | Q | V | L | Y | D | L | V | S | L | L | N | V | S | V | D | E | F | F | L | P | A | S | S | Q | V | K | S | T | K | R | R | Q | L | E | N | K | I | D | N | F | T | D | A | D | L | V | I | X | E | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
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108 | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | V | K | L | S | A | E | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | A | D | G | I | V | K | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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105 | . | . | . | . | 110 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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