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Job DescriptionP67430
Confidence67.00%DateThu Jan 5 12:10:35 GMT 2012
Rank325Aligned Residues88
% Identity6%Templatec3ivpD_
PDB info PDB header:dna binding proteinChain: D: PDB Molecule:putative transposon-related dna-binding protein; PDBTitle: the structure of a possible transposon-related dna-binding protein2 from clostridium difficile 630.
Resolution2.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
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Query Sequence  GMGLSELLKTAEVPKGSFYHYFRSKEAFGVAMLERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGTISGCL
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Template Sequence  GLTREQVGAXIEIDPRYLTNIENKGQHPSLQVLYDLVSLLNVSVDEFFLPASSQVKSTKRRQLENKIDNFTDADLVIXES
Template Known Secondary structure  T

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   25....30.........40.........50.........60.........70.........80.........90.........100....
 
   108.110.....
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Query Sequence  TVKLSAEV
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Template Sequence  VADGIVKS
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   105....110..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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