Job Description P67430 Confidence 99.79% Date Thu Jan 5 12:10:35 GMT 2012 Rank 88 Aligned Residues 174 % Identity 14% Template c3crjC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcription regulator; PDBTitle: crystal structure of a tetr transcription regulator from haloarcula2 marismortui atcc 43049 Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	R	E	H	L	L	A	T	G	E	Q	L	C	L	Q	R	G	F	T	G	M	G	L	S	E	L	L	K	T	A	E	V	P	K	G	S	F	Y	H	Y	F	R	S	K	E	A	F	G	V	A	M	L	E	R	H	Y	A	A	Y	H	Q	R	L	T	E	L	L	Q	S	G	E	G	N	Y	R	D	R	I	L
Query Conservation
Alig confidence													.	.	.	.	.													.	.																																			.	.	.
Template Conservation													.	.	.	.	.													.	.																																			.	.	.
Template Sequence		D	Q	T	E	E	I	X	Q	A	T	Y	.	.	.	.	.	R	A	L	R	D	L	T	I	Q	R	I	A	.	.	D	E	Y	S	T	A	A	V	H	Y	Y	Y	D	T	K	D	D	L	L	A	A	F	L	D	Y	L	L	E	R	F	V	D	S	I	.	.	.	H	D	V	E	T	T	D	P	E	A	R	L	N
Template Known Secondary structure				G	G	G	T	T	T	S	T	T	.	.	.	.	.	G	G	G					S					.	.	T	T			T	T	T	S		T	T	S	S																						.	.	.	T	T					S
Template Predicted Secondary structure													.	.	.	.	.													.	.																																			.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	Y	Q	Q	T	L	N	Q	F	C	Q	H	G	T	I	S	G	C	L	T	V	K	L	S	A	E	V	C	D	L	S	E	D	M	R	S	A	M	D	K	G	A	R	G	V	I	A	L	L	S	Q	A	L	E	N	G	R	E	N	H	C	L	T	F	C	G	E	P	L	Q	Q	A	Q	V	L	Y	A	L	W
Query Conservation
Alig confidence																							.	.																																										.
Template Conservation																							.	.																																										.
Template Sequence		L	L	L	D	E	L	L	V	K	P	Q	E	N	P	D	L	S	V	A	L	L	.	.	E	X	R	S	Q	A	P	Y	K	E	A	F	S	D	R	F	R	Q	N	D	E	Y	V	R	Y	X	L	K	A	V	I	N	H	G	I	D	E	G	V	F	T	.	D	V	D	A	E	H	V	T	R	S	L	L	T	I	I
Template Known Secondary structure									T	G	G	G	S										.	.						G	G	G																														T	S	S		.
Template Predicted Secondary structure																							.	.																																										.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	A	N	L	Q	A	K	I	S	R	S	F	E	P	L	E	N	A	L	A	H	V	K	N	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	A	R	T	R	A	V	X	L	D	D	T	E	E	L	E	T	A	R	Q	T	A	S	E	Y	A
Template Known Secondary structure											T	T		T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions