Job Description P67430 Confidence 99.81% Date Thu Jan 5 12:10:35 GMT 2012 Rank 76 Aligned Residues 177 % Identity 15% Template c3cjdB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of putative tetr transcriptional regulator2 (yp_510936.1) from jannaschia sp. ccs1 at 1.79 a resolution Resolution 1.79 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	R	E	H	L	L	A	T	G	E	Q	L	C	L	Q	R	G	F	T	G	M	G	L	S	E	L	L	K	T	A	E	V	P	K	G	S	F	Y	H	Y	F	R	S	K	E	A	F	G	V	A	M	L	E	R	H	Y	A	A	Y	H	Q	R	L	T	E	L	L	Q	S	G	E	G	N	Y	R	D	R	I	L
Query Conservation
Alig confidence																																																																			.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.
Template Sequence		A	L	R	E	K	L	I	D	L	A	E	A	Q	I	E	A	E	G	L	A	S	L	R	A	R	E	L	A	R	Q	A	D	C	A	V	G	A	I	Y	T	H	F	Q	D	L	N	A	L	T	L	E	V	N	G	R	T	F	A	R	L	G	A	A	V	G	.	.	.	.	.	A	V	D	H	P	N	E	R	L	I
Template Known Secondary structure																				G	G	G											T	S									S	S	S																						.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	Y	Q	Q	T	L	N	Q	F	C	Q	H	G	T	I	S	G	C	L	T	V	K	L	S	A	E	V	C	D	L	S	E	D	M	R	S	A	M	D	K	G	A	R	G	V	I	A	L	L	S	Q	A	L	E	N	G	R	E	N	H	C	L	T	F	C	G	E	P	L	Q	Q	A	Q	V	L	Y	A	L	W
Query Conservation
Alig confidence																									.	.	.	.																																			.	.	.
Template Conservation																									.	.	.	.																																			.	.	.
Template Sequence		A	X	S	H	A	Y	L	A	F	A	R	E	H	P	K	L	W	R	A	L	F	D	V	.	.	.	.	E	X	R	S	D	G	P	V	P	Q	W	Y	G	H	A	X	A	Q	L	F	S	Y	I	T	T	P	L	A	K	I	F	P	E	S	.	.	.	D	D	A	E	L	D	L	X	T	R	T	L	F	S	S	V
Template Known Secondary structure														S										S	.	.	.	.	S			S	S	S																										T	T		.	.	.
Template Predicted Secondary structure																									.	.	.	.																																			.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		L	G	A	N	L	Q	A	K	I	S	R	.	.	.	.	S	F	E	P	L	E	N	A	L	A	H	V	K	N	I	I	A	T
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.
Template Conservation
Template Sequence		H	G	I	V	L	L	G	L	E	N	R	I	S	G	V	P	G	E	Q	L	K	T	X	I	R	L	L	L	E	Q	V	G	R
Template Known Secondary structure										T	T		T	T	S			G	G	G										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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