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Job DescriptionP67430
Confidence99.82%DateThu Jan 5 12:10:35 GMT 2012
Rank72Aligned Residues178
% Identity16%Templatec3bjbE_
PDB info PDB header:transcription regulatorChain: E: PDB Molecule:probable transcriptional regulator, tetr family protein; PDBTitle: crystal structure of a tetr transcriptional regulator from rhodococcus2 sp. rha1
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  KHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGSFYHYFRSKEAFGVAMLERHYAAYHQRLTELLQSGEGNY
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Template Sequence  SEEQRARHVRXLEAAIELATEKELARVQXHEVAKRAGVAIGTLYRYFPSKTHLFVAVXVDQIDRX. . . . . . . GVPPGESP
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   15....20.........30.........40.........50.........60.........70......... 80.......
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  RDRILAYYQQTLNQFCQHGTISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQAQV
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Template Sequence  QDAVYNVLVRATRGLLRRPALSTAXIQSTSTANVASVPDAGKVDRAFRQIXLDAA. . . . . . . . . . GIEHPTEEDLTALRL
Template Known Secondary structure  SS

TTT
GGGT..........T
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   94.....100.........110.........120.........130.........140........ .150.........160...
 
   163......170........ .180.........190.......
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Query Sequence  LYALWLGANLQAKISR. SFEPLENALAHVKNIIATP
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Template Sequence  LVQLWFGVIQSCLNGRVSIPDAESDIRRACDLLLVN
Template Known Secondary structure  TTSS
TTT
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   164.....170.........180.........190.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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