Job Description P67430 Confidence 99.88% Date Thu Jan 5 12:10:35 GMT 2012 Rank 23 Aligned Residues 180 % Identity 18% Template c3anpD_ PDB info PDB header:transcription Chain: D: PDB Molecule:transcriptional repressor, tetr family; PDBTitle: crystal structure of thermus thermophilus fadr, a tetr familly2 transcriptional repressor, in complex with lauroyl-coa. Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	E	H	L	L	A	T	G	E	Q	L	C	L	Q	R	G	F	T	G	M	G	L	S	E	L	L	K	T	A	E	V	P	K	G	S	F	Y	H	Y	F	R	S	K	E	A	F	G	V	A	M	L	E	R	H	Y	A	A	Y	H	Q	R	L	T	E	L	L	Q	S	G	E	G	N	Y	R	D	R	I	L	A
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		R	R	E	R	I	F	R	A	A	X	E	L	F	R	N	R	G	F	Q	E	T	T	A	T	E	I	A	K	A	A	H	V	S	R	G	T	F	F	N	Y	Y	P	Y	K	E	A	V	L	L	D	Y	G	S	Q	L	L	A	G	L	R	E	E	V	R	R	L	L	A	.	Q	G	R	E	P	V	E	V	L	R	H
Template Known Secondary structure																			T	T	T										T	T											S	S	T																									.	T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	Q	Q	T	L	N	Q	F	C	Q	H	G	T	I	S	G	C	L	T	V	K	L	S	A	E	V	C	D	L	S	E	D	M	R	S	A	M	D	K	G	A	R	G	V	I	A	L	L	S	Q	A	L	E	N	G	R	E	N	H	C	L	T	F	C	G	E	P	L	Q	Q	A	Q	V	L	Y	A	L	W	L
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		L	F	R	V	L	A	E	G	T	A	R	E	K	D	L	L	L	P	X	F	Y	E	.	.	.	.	.	L	L	N	P	D	P	V	R	A	R	A	A	F	E	A	L	P	L	G	D	L	I	A	E	I	L	K	P	L	R	E	Q	G	V	L	R	Q	D	F	S	L	E	R	X	G	R	T	L	A	D	L	Y	F
Template Known Secondary structure													T											.	.	.	.	.	T	T		S	S																												T		S		S	S	S
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	N	L	Q	A	K	I	S	R	S	F	E	P	L	E	N	A	L	A	H	V	K	N	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	A	L	R	W	A	A	Y	T	P	G	R	D	L	A	E	E	L	E	K	N	L	R	L	L
Template Known Secondary structure										T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions