Return to main results Retrieve Phyre Job Id

Job DescriptionP67430
Confidence99.85%DateThu Jan 5 12:10:35 GMT 2012
Rank48Aligned Residues189
% Identity17%Templatec2wuiA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of mexz, a key repressor responsible for2 antibiotic resistance in pseudomonas aeruginosa.
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 


















Query SS confidence 















































































Query Sequence  HDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGSFYHYFRSKEAFGVAMLERHYAAYHQRLTELLQSGEGNYRDRI
Query Conservation    

  

 

  
    
    

  

  



   

  
 

  
                              
Alig confidence 




























































....














Template Conservation 
 

  

 

  

   
    

  

  



   

  
 


 
   
        ....               
Template Sequence  QKTRDGILDAAERVFLEKGVGTTAMADLADAAGVSRGAVYGHYKNKIEVCLAMCDRAFGQI. . . . EVPDENARVPALDIL
Template Known Secondary structure  TS
TTT

TS

SSTTS....



TT
SS
Template Predicted Secondary structure 













....





Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70 .........80.....
 
   87..90.........100. ........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure  .












Query SS confidence 














.































































Query Sequence  LAYYQQTLNQFCQHG. TISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQAQVLYA
Query Conservation                 .                                       
      
           
  
  
Alig confidence 














.































































Template Conservation                                                         
                        
Template Sequence  LRAGMGFLRQCCEPGSVQRVLEILYLKCERSDENEPLLRRRELLEKQGQRFGLRQIRRAVERGELPARLDVELASIYLQS
Template Known Secondary structure  SSSTS



STTTTSS
TTB
Template Predicted Secondary structure 

















Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   166...170.........180 .........190.... .....
Predicted Secondary structure 


......




Query SS confidence 














. . . . .













.




Query Sequence  LWLGANLQAKISRSF. . . . . EPLENALAHVKNII. ATPAV
Query Conservation     
           .....            

.  
  
Alig confidence 














.....













.




Template Conservation     
                          
  
   


Template Sequence  LWDGICGTLAWTERLRDDPWNRAERMFRAGLDSLRSSPYL
Template Known Secondary structure  TT
STTSSS

GGG
Template Predicted Secondary structure 








Template SS confidence 







































   166...170.........180.........190.........200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions