Job Description P67430 Confidence 99.87% Date Thu Jan 5 12:10:35 GMT 2012 Rank 38 Aligned Residues 182 % Identity 12% Template c2qtqB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a predicted dna-binding transcriptional regulator2 (saro_1072) from novosphingobium aromaticivorans dsm at 1.85 a3 resolution Resolution 1.85 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	E	H	L	L	A	T	G	E	Q	L	C	L	Q	R	G	F	T	G	M	G	L	S	E	L	L	K	T	A	E	V	P	K	G	S	F	Y	H	Y	F	R	S	K	E	A	F	G	V	A	M	L	E	R	H	Y	A	A	Y	H	Q	R	L	T	E	L	L	Q	S	G	E	G	N	Y	R	D	R	I	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	D	L	L	L	Q	T	A	S	N	I	X	R	E	G	D	V	V	D	I	S	L	S	E	L	S	L	R	S	G	L	N	S	A	L	V	K	Y	Y	F	G	N	K	A	G	L	L	K	A	L	L	D	R	D	X	E	N	I	V	K	S	V	D	A	L	L	A	K	D	D	X	S	P	E	A	K	L	R	R
Template Known Secondary structure																		T		S												T											S	S																									S			S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Y	Q	Q	T	L	N	Q	F	C	Q	H	G	T	I	S	G	C	L	T	V	K	L	S	A	E	V	C	D	L	S	E	D	M	R	S	A	M	D	K	G	A	R	G	V	I	A	L	L	S	Q	A	L	E	N	G	R	E	N	H	C	L	T	F	C	G	E	P	L	Q	Q	A	Q	V	L	Y	A	L	W	L
Query Conservation
Alig confidence																									.	.	.																																						.
Template Conservation																									.	.	.																																						.
Template Sequence		H	I	S	K	C	I	D	T	Y	Y	D	Y	P	Y	L	N	R	L	L	X	R	L	V	.	.	.	R	D	S	D	E	A	E	A	K	R	I	A	D	Q	Y	L	L	P	L	H	R	A	Y	N	R	F	I	G	E	G	V	K	A	G	V	F	R	.	P	I	N	P	Q	L	F	Y	F	T	V	T	G	A	A	D
Template Known Secondary structure														T	T										.	.	.																T																	T	T	S	B		.													T
Template Predicted Secondary structure																									.	.	.																																						.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		169	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		G	A	N	L	.	.	.	.	Q	A	K	I	S	R	S	F	E	P	L	E	N	A	L	A	H	V	K	N	I	I
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		R	F	F	S	A	R	L	V	L	K	H	C	F	D	Q	D	T	L	T	E	Q	L	R	D	S	Y	R	E	H	T
Template Known Secondary structure														S			S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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