Job Description P67430 Confidence 99.75% Date Thu Jan 5 12:10:35 GMT 2012 Rank 101 Aligned Residues 172 % Identity 13% Template c2iu5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type dhaklm operon transcriptional activator dhas; PDBTitle: dihydroxyacetone kinase operon activator dhas Resolution 1.6 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	E	H	D	T	R	E	H	L	L	A	T	G	E	Q	L	C	L	Q	R	G	F	T	G	M	G	L	S	E	L	L	K	T	A	E	V	P	K	G	S	F	Y	H	Y	F	R	S	K	E	A	F	G	V	A	M	L	E	R	H	Y	A	A	Y	H	Q	R	L	T	E	L	L	Q	S	G	E	G	N	Y	R
Query Conservation
Alig confidence																																																																			.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.
Template Sequence		E	K	S	I	I	T	Q	K	I	I	A	K	A	F	K	D	L	M	Q	S	N	A	Y	H	Q	I	S	V	S	D	I	M	Q	T	A	K	I	R	R	Q	T	F	Y	N	Y	F	Q	N	Q	E	E	L	L	S	W	I	F	E	N	D	F	A	E	L	I	.	.	.	.	.	N	D	N	S	D	Y	Y	G	W	Q
Template Known Secondary structure			T	T	S																	S		G	G	G											T	S		G	G	G	G	G	G	T		S	S																		.	.	.	.	.	T	S	S			S	S
Template Predicted Secondary structure																																																																			.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	I	L	A	Y	Y	Q	Q	T	L	N	Q	F	C	Q	H	G	T	I	S	G	C	L	T	V	K	L	S	A	E	V	C	D	L	S	E	D	M	R	S	A	M	D	K	G	A	R	G	V	I	A	L	L	S	Q	A	L	E	N	G	R	E	N	H	C	L	T	F	C	G	E	P	L	Q	Q	A	Q	V	L
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Sequence		N	E	L	L	L	L	L	R	Y	L	D	E	.	.	.	.	.	.	.	.	N	Q	I	F	Y	Q	K	I	F	V	I	D	K	N	F	E	H	F	F	L	I	Q	W	E	N	L	L	D	K	V	I	F	D	Q	E	.	.	.	.	.	.	K	K	S	D	Y	H	W	S	D	L	E	K	S	F	I	C	R	Y	N
Template Known Secondary structure														.	.	.	.	.	.	.	.	T												T	T																						.	.	.	.	.	.			S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		Y	A	L	W	L	G	A	N	L	Q	A	K	I	S	R	S	.	.	F	E	P	L	E	N	A	L	A	H	V	K	N	I	I
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		A	A	A	I	C	A	I	T	R	E	S	I	I	R	G	N	S	L	E	K	L	Y	S	Q	I	V	N	L	L	L	A	Q	I
Template Known Secondary structure																T			S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions