Job Description P67430 Confidence 99.83% Date Thu Jan 5 12:10:35 GMT 2012 Rank 61 Aligned Residues 179 % Identity 23% Template c2fd5A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: the crystal structure of a transcriptional regulator from pseudomonas2 aeruginosa pao1 Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	K	H	T	E	H	D	T	R	E	H	L	L	A	T	G	E	Q	L	C	L	Q	R	G	F	T	G	M	G	L	S	E	L	L	K	T	A	E	V	P	K	G	S	F	Y	H	Y	F	R	S	K	E	A	F	G	V	A	M	L	E	R	H	Y	A	A	Y	H	Q	R	L	T	E	L	L	Q	S	G	E	G
Query Conservation
Alig confidence					.																																																																								.	.
Template Conservation					.																																																																								.	.
Template Sequence		M	S	D	.	K	K	T	Q	T	R	A	R	I	L	G	A	A	T	Q	A	L	L	E	R	G	A	V	E	P	S	V	G	E	V	M	G	A	A	G	L	T	V	G	G	F	Y	A	H	F	Q	S	K	D	A	L	M	L	E	A	F	E	Q	L	L	G	K	R	R	E	L	L	G	E	L	D	.	.	P	G	L
Template Known Secondary structure					.																					T	T	T	S										T	T			G	G	G	G	G	G	T		S																							T	S		.	.	T	T	S
Template Predicted Secondary structure					.																																																																								.	.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		N	Y	R	D	R	I	L	A	Y	Y	Q	Q	T	L	N	Q	F	C	Q	H	G	T	I	S	G	.	C	L	T	V	K	L	S	A	E	V	C	D	L	S	E	D	M	R	S	A	M	D	K	G	A	R	G	V	I	A	L	L	S	Q	A	L	E	N	G	R	E	N	H	C	L	T	F	C	G	E	P	L	Q	Q
Query Conservation																											.
Alig confidence																											.																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	K	E	R	R	A	L	A	A	A	F	Y	L	S	R	K	H	R	D	A	Q	V	D	A	G	C	P	L	P	A	T	L	A	E	V	A	R	L	P	E	G	F	R	E	V	L	S	R	H	V	E	I	M	V	T	S	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	P	E	E	T	D	V
Template Known Secondary structure															S						T	T		S	S	S			S					G	G	G	G	G	G	S																					.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	G	G	G
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.														.	.	.	140	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	V	L	Y	A	L	W	L	G	A	N	L	Q	A	K	I	S	R	S	F	E	P	L	E	N	A	L	A	H	V	K	N	I	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	D	L	V	L	M	I	G	G	L	A	L	A	R	A	L	G	P	G	E	L	S	D	R	V	L	R	A	A	K	Q	A	V	N
Template Known Secondary structure																					S	S													T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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