Job Description P67430 Confidence 99.90% Date Thu Jan 5 12:10:35 GMT 2012 Rank 11 Aligned Residues 191 % Identity 13% Template c1rktA_ PDB info PDB header:transcription Chain: A: PDB Molecule:protein yfir; PDBTitle: crystal structure of yfir, a putative transcriptional regulator from2 bacillus subtilis Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	K	H	T	E	H	D	T	R	E	H	L	L	A	T	G	E	Q	L	C	L	Q	R	G	F	T	G	M	G	L	S	E	L	L	K	T	A	E	V	P	K	G	S	F	Y	H	Y	F	R	S	K	E	A	F	G	V	A	M	L	E	R	H	Y	A	A	Y	H	Q	R	L	T	E	L	L	Q	S	G	E	G
Query Conservation
Alig confidence																																																																													.	.
Template Conservation																																																																													.	.
Template Sequence		V	T	K	E	H	K	D	K	R	Q	A	E	I	L	E	A	A	K	T	V	F	K	R	K	G	F	E	L	T	T	X	K	D	V	V	E	E	S	G	F	S	R	G	G	V	Y	L	Y	F	S	S	T	E	E	X	F	R	R	I	I	E	T	G	L	D	E	G	L	R	K	L	D	K	S	A	.	.	E	H	Q
Template Known Secondary structure		T																									S	T	T											T	S							T	T		S																									T	.	.	T	T	S
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	R	D	R	I	L	A	Y	Y	Q	Q	T	L	N	Q	F	C	Q	H	G	T	I	S	G	C	L	T	V	K	L	S	A	E	V	C	D	L	S	E	D	M	R	S	A	M	D	K	G	A	R	G	V	I	A	L	L	S	Q	A	L	E	N	G	R	E	N	H	C	L	T	F	C	G	E	P	L	Q	Q	A
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		S	V	W	A	S	I	S	S	Y	L	D	E	L	T	E	G	L	R	D	V	A	D	T	L	A	P	V	Q	F	E	Y	L	V	.	T	A	W	R	N	E	E	R	R	Q	Y	L	E	K	R	Y	D	L	F	V	E	R	F	S	R	L	L	Q	K	G	I	D	Q	G	E	F	Q	P	V	Q	P	L	A	T	I	A
Template Known Secondary structure																		T	T	T	G	G	G	S	S										.	G	G	G	G																													T	T					S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	L	Y	A	L	W	L	G	A	N	L	Q	A	K	I	S	R	S	F	E	P	L	E	N	A	L	A	H	V	K	N	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	F	L	N	X	N	D	G	I	I	Q	N	A	L	Y	F	D	E	E	K	A	D	V	S	G	L	A	E	S	A	K	L	Y
Template Known Secondary structure																		S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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