Job Description P33643 Confidence 98.54% Date Thu Jan 5 11:52:28 GMT 2012 Rank 21 Aligned Residues 103 % Identity 15% Template d2uubd1 SCOP info Alpha-L RNA-binding motif Alpha-L RNA-binding motif Ribosomal protein S4 Resolution 2.9

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		Q	R	L	D	Q	A	L	A	E	M	F	P	D	Y	S	R	S	R	I	K	E	W	I	L	D	Q	R	V	L	V	N	G	K	V	C	D	K	P	K	E	K	V	L	G	G	E	Q	V	A	I	N	A	E	I	E	E	E	A	R	F	E	P	Q	D	I	P	L	D	I	V	Y	E	D	E	D	I	I	I	.	I
Query Conservation																																																																																.
Alig confidence																																																																																.
Template Conservation
Template Sequence		S	R	L	D	N	V	V	Y	R	L	G	F	A	V	S	R	R	Q	A	R	Q	L	V	R	H	G	H	I	T	V	N	G	R	R	V	D	L	P	S	Y	R	V	R	P	G	D	E	I	A	V	A	E	K	S	R	N	L	E	L	I	R	Q	N	L	E	A	M	K	G	R	K	V	G	P	W	L	S	L	D	V
Template Known Secondary structure		T	B								T	T	S	S	S	S										T	T					T	T						T	T		B			T	T							G	G	G	T	T												T	T					T	T					T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	P	R	D	L	V	V	H	P	G	A	G	N	P	D	G	T	V	L	N	A	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	M	K	G	K	F	L	R	L	P	D	R	E	D	L	A	L	P	V	N	E	Q	L
Template Known Secondary structure		T	T	T						S				G	G	G				S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions