Job Description P33643 Confidence 97.52% Date Thu Jan 5 11:52:28 GMT 2012 Rank 26 Aligned Residues 131 % Identity 16% Template d2apoa2 SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase II TruB Resolution 1.95

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	I	I	I	I	N	K	P	R	D	L	V	V	H	P	G	A	G	N	P	D	G	T	V	L	N	A	L	L	H	Y	Y	P	P	I	A	D	V	P	R	A	G	I	V	H	R	L	D	K	D	T	T	G	L	M	V	V	A	K	T	V	P	A	Q	T	R	L	V	E	S	L	Q	R	R	E	I	T	R	E
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.													.	.	.	.																									.	.													.	.
Template Conservation																.	.	.	.	.	.	.	.													.	.	.	.																									.	.													.	.
Template Sequence		Y	G	V	V	V	V	D	K	P	R	G	P	T	S	.	.	.	.	.	.	.	.	H	E	V	S	T	W	V	K	K	I	L	N	.	.	.	.	L	D	K	A	G	H	G	G	T	L	D	P	K	V	T	G	V	L	P	V	A	L	E	R	.	.	A	T	K	T	I	P	M	W	H	I	P	P	.	.	K	E
Template Known Secondary structure		T									S	S	S			.	.	.	.	.	.	.	.											T	T	.	.	.	.		S					S	S				T	T										G	G	.	.	G	G	G	G	G	G	G	T	T	S	S		.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.													.	.	.	.																									.	.													.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.			.	.
		171	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		Y	E	A	V	A	I	.	G	H	M	T	A	G	G	T	V	D	E	P	I	S	R	H	P	T	K	R	T	H	M	A	V	H	P	M	G	K	P	A	V	T	H	Y	R	I	M	E	H	F	R	V	H	T	R	L	R	L	R	L	E	T	G	R	T	H	Q	I	R	V	H	M	A	H	I	T
Query Conservation								.
Alig confidence								.																										.	.	.	.	.																											.	.
Template Conservation																																		.	.	.	.	.																											.	.
Template Sequence		Y	V	C	L	M	H	L	H	R	D	A	S	E	E	D	I	L	R	V	F	K	E	F	T	G	R	I	Y	Q	R	R	I	.	.	.	.	.	R	K	I	H	E	L	E	L	L	D	K	D	G	K	D	V	L	F	R	V	K	C	Q	S	G	T	.	.	Y	I	R	K	L	C	E	D	I	G
Template Known Secondary structure									S	S															S									.	.	.	.	.													T	T										T	T		.	.
Template Predicted Secondary structure																																		.	.	.	.	.																											.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions