Job Description P33643 Confidence 99.97% Date Thu Jan 5 11:52:28 GMT 2012 Rank 12 Aligned Residues 146 % Identity 21% Template d1vioa1 SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase RsuA/RluD Resolution 1.59

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	E	D	I	I	I	I	N	K	P	R	D	L	V	V	H	P	G	A	G	N	P	D	G	T	V	L	N	A	L	L	H	Y	Y	P	P	I	A	D	V	P	R	A	G	I	V	H	R	L	D	K	D	T	T	G	L	M	V	V	A	K	T	V	P	A	Q	T	R	L	V	E	S	L	Q	R	R	E	I	T
Query Conservation
Alig confidence																							.	.	.												.	.	.	.	.																															.	.
Template Conservation																							.	.	.												.	.	.	.	.																															.	.
Template Sequence		E	E	G	Q	Y	F	M	L	N	K	P	Q	G	C	V	C	S	N	D	D	Y	.	.	.	P	T	I	Y	Q	F	F	D	Y	P	L	.	.	.	.	.	A	G	K	L	H	S	A	G	R	L	D	V	D	T	T	G	L	V	L	L	T	D	D	G	Q	W	S	H	R	I	.	.	T	S	P	K	H	H	C	E
Template Known Secondary structure													T	T		B	S	S					.	.	.		B	G	G	G	G	S		T	T	G	.	.	.	.	.	G	G	G				S	S				T	T									S									.	.			T	T	S
Template Predicted Secondary structure																							.	.	.												.	.	.	.	.																															.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	Y	E	A	V	A	I	G	H	M	T	A	G	G	T	V	D	E	P	I	S	R	H	P	T	K	R	T	H	M	A	V	H	P	M	G	K	P	A	V	T	H	Y	R	I	M	E	H	F	R	V	H	T	R	L	R	L	R	L	E	T	G	R	T	H	Q	I	R	V	H	M	A	H	I	T	H	P	L	V
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.																														.
Template Conservation															.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		K	T	Y	L	V	T	L	A	D	P	V	E	E	.	.	.	.	.	.	.	.	.	.	N	Y	S	A	A	C	A	E	G	I	L	L	R	G	E	K	E	P	T	K	P	A	K	L	E	I	L	D	D	.	Y	N	V	N	L	T	I	S	E	G	R	Y	H	Q	V	K	R	M	F	A	A	L	G	N	K	V	V
Template Known Secondary structure									S	S				T	.	.	.	.	.	.	.	.	.	.	T												T	T		S	S											S	S	.	S							S				T	T									T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.											.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
									249	250	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	D	P	V	Y	G	G
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	H	R	W	K	I	G	D	V	V	L	D	E
Template Known Secondary structure									T	T					T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions