Job Description P33643 Confidence 98.58% Date Thu Jan 5 11:52:28 GMT 2012 Rank 20 Aligned Residues 83 % Identity 18% Template d1c06a_ SCOP info Alpha-L RNA-binding motif Alpha-L RNA-binding motif Ribosomal protein S4 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.								.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																											.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.
Query Sequence		Q	R	L	D	Q	A	L	A	E	M	F	P	D	Y	S	R	S	R	I	K	E	W	I	L	D	Q	R	V	L	V	N	G	K	V	C	D	K	P	K	E	K	V	L	G	G	E	Q	V	A	I	N	A	E	I	E	E	E	.	.	.	.	.	.	.	A	R	F	E	P	Q	D	I	P	L	D	I	V	Y	E	D
Query Conservation																																																											.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	L	D	N	L	V	Y	R	L	G	L	A	R	T	R	R	Q	A	R	Q	L	V	T	H	G	H	I	L	V	D	G	S	R	V	N	I	P	S	Y	R	V	K	P	G	Q	T	I	A	V	R	E	K	S	R	N	L	Q	V	I	K	E	A	L	E	A	N	N	Y	I	P	D	Y	L	S	F	D	P	E	K
Template Known Secondary structure												T	S	S	S	S										T	S					T	T						S	S					S	S							G	G	G	S	S								T	T							S	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		91	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	I	I	I	I	N	K	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	G	T	Y	T	R	L	P	E
Template Known Secondary structure		T						S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions