Job Description P33643 Confidence 95.79% Date Thu Jan 5 11:52:28 GMT 2012 Rank 42 Aligned Residues 69 % Identity 14% Template c3iz6D_ PDB info PDB header:ribosome Chain: D: PDB Molecule:40s ribosomal protein s4 (s4e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		L	D	Q	A	L	A	E	M	F	P	D	Y	.	S	R	S	R	I	K	E	W	I	L	D	Q	R	V	L	V	N	G	K	V	C	D	K	P	K	E	K	V	L	G	G	E	Q	V	A	I	N	A	E	I	E	E	E	A	R	F	E	P	Q	D	I	P	L	D	I	V	Y	E	D	E	D	I	I	I	I	N	K
Query Conservation														.
Alig confidence														.																																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	L	I	I	R	N	R	L	K	Y	A	L	T	Y	R	E	V	I	S	I	L	M	Q	R	H	V	L	V	D	G	K	V	R	T	D	K	T	Y	P	A	G	F	M	D	V	I	S	I	.	.	.	.	.	.	.	.	.	.	P	K	T	G	E	N	Y	R	L	L	Y	D	T	K	G	R	F	R	L	Q	S
Template Known Secondary structure											T	T	S	S		S	S	S	T						T	T					T	T						T	T					T	T						.	.	.	.	.	.	.	.	.	.		S	S										T	T	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.											.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions