Job Description P33643 Confidence 100.00% Date Thu Jan 5 11:52:28 GMT 2012 Rank 8 Aligned Residues 205 % Identity 21% Template c3dh3C_ PDB info PDB header:isomerase/rna Chain: C: PDB Molecule:ribosomal large subunit pseudouridine synthase f; PDBTitle: crystal structure of rluf in complex with a 22 nucleotide2 rna substrate Resolution 3.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	G	Q	R	L	D	Q	A	L	A	E	M	F	P	D	Y	S	R	S	R	I	K	E	W	I	L	D	Q	R	V	L	V	N	G	K	V	C	D	K	P	K	E	K	V	L	G	G	E	Q	V	A	I	N	A	E	I	E	E	E	A	R	F	E	P	Q	D	I	P	L	D	I	V	Y	E	D	E	D	I	I
Query Conservation
Alig confidence														.																										.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																										.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	S	V	R	L	N	K	Y	I	S	E	.	S	G	I	C	S	R	R	E	A	D	R	Y	I	E	Q	G	N	V	F	L	N	G	K	R	A	.	T	I	G	D	Q	V	K	P	G	D	V	V	K	V	N	G	Q	L	I	E	P	R	.	.	.	.	.	.	.	.	.	.	.	E	A	E	D	L	V	L	I
Template Known Secondary structure													T	.	T	T	S	S											T	T					T	T				.		T	T					T	T						T	T							.	.	.	.	.	.	.	.	.	.	.		G	G	G
Template Predicted Secondary structure														.																										.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.												.	.	.	.	.	.	.	70
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	N	K	P	R	D	L	V	V	H	P	G	A	G	N	P	D	G	T	V	L	N	A	L	L	H	Y	Y	P	P	I	A	D	V	P	R	A	G	I	V	H	R	L	D	K	D	T	T	G	L	M	V	V	A	K	T	V	P	A	Q	T	R	L	V	E	S	L	Q	R	R	E	I	T	R	E	Y	E	A	V
Query Conservation
Alig confidence																		.											.	.	.	.	.	.	.																																		.	.
Template Conservation																		.											.	.	.	.	.	.	.																																		.	.
Template Sequence		A	L	N	K	P	V	G	I	V	S	T	T	E	D	G	E	.	R	D	N	I	V	D	F	V	N	H	.	.	.	.	.	.	.	S	K	R	V	F	P	I	G	R	L	D	K	D	S	Q	G	L	I	F	L	T	N	H	G	D	L	V	N	K	I	L	R	A	.	.	G	N	D	H	E	K	E	Y	L	V	T
Template Known Secondary structure							T	T		B					S	S		.	T	T	B						T		.	.	.	.	.	.	.	S	S					S	S				T	T									S		T									G	.	.	G	G
Template Predicted Secondary structure																		.											.	.	.	.	.	.	.																																		.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.								.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		A	I	G	H	M	T	A	G	G	T	V	D	E	P	I	S	R	H	P	T	K	R	T	H	M	A	V	H	P	M	G	K	P	A	V	T	H	Y	R	I	M	E	H	F	R	V	H	T	R	L	R	L	R	L	E	T	G	R	T	H	Q	I	R	V	H	M	A	H	I	T	H	P	L	V	G	D	.	.	P	V
Query Conservation																																																																														.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	K	P	I	T	E	E	F	I	R	G	M	S	A	G	V	P	I	L	G	T	V	T	K	K	C	K	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	K	E	A	P	F	V	F	R	I	T	L	V	Q	G	L	N	R	Q	I	R	R	M	C	E	H	F	G	Y	E	V	K	K	L	E	R	T	R
Template Known Secondary structure			S	S												T			B		S	S	S	B						.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S							S				T	T									T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.														.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		253	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	M	N
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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