Job Description P33643 Confidence 99.13% Date Thu Jan 5 11:52:28 GMT 2012 Rank 15 Aligned Residues 102 % Identity 19% Template c3bbnD_ PDB info PDB header:ribosome Chain: D: PDB Molecule:ribosomal protein s4; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. Resolution 9.40 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	D	Q	A	L	A	E	M	F	P	D	Y	S	R	S	R	I	K	E	W	I	L	D	Q	R	V	L	V	N	G	K	V	C	D	K	P	K	E	K	V	L	G	G	E	Q	V	A	I	N	A	E	I	E	E	E	A	R	F	E	P	Q	D	I	P	L	D	I	V	Y	E	D	E	D	I	I	I	I	N
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		M	R	L	D	N	I	L	F	R	L	G	M	A	P	T	I	P	G	A	R	Q	L	V	N	H	R	H	I	L	V	N	G	R	I	V	D	I	P	S	Y	R	C	K	P	Q	D	T	I	M	A	R	.	D	E	Q	K	S	I	A	L	I	Q	N	S	L	D	L	S	P	R	E	E	L	P	K	H	L	T	L	N
Template Known Secondary structure		S	B	T	T	T	T	T	T	T	T	T	S	S	S	S	S									T	T					T	T						T	T		B			T	T							.	S	S	T	T	S								S	S	S	T	T	T	S				T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
				98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	K	P	R	D	L	V	V	H	P	G	A	G	N	P	D	G	T	V	L	N	A	L	L
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		P	F	P	Y	K	G	L	V	N	Q	I	I	D	S	K	W	V	G	L	K	I	N	E	L	L
Template Known Secondary structure		T	T	T	T						S				G	G	G				S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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