Job Description P33643 Confidence 99.97% Date Thu Jan 5 11:52:28 GMT 2012 Rank 13 Aligned Residues 141 % Identity 18% Template c2gmlA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribosomal large subunit pseudouridine synthase f; PDBTitle: crystal structure of catalytic domain of e.coli rluf Resolution 2.60 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	D	I	I	I	I	N	K	P	R	D	L	V	V	H	P	G	A	G	N	P	D	G	T	V	L	N	A	L	L	H	Y	Y	P	P	I	A	D	V	P	R	A	G	I	V	H	R	L	D	K	D	T	T	G	L	M	V	V	A	K	T	V	P	A	Q	T	R	L	V	E	S	L	Q	R	R	E	I	T	R
Query Conservation
Alig confidence																						.										.	.	.	.	.	.	.																																	.	.
Template Conservation																						.										.	.	.	.	.	.	.																																	.	.
Template Sequence		D	L	V	L	I	A	L	N	K	P	V	G	I	V	S	T	T	E	D	G	.	E	R	D	N	I	V	D	F	V	.	.	.	.	.	.	.	N	H	S	K	R	V	F	P	I	G	R	L	D	K	D	S	Q	G	L	I	F	L	T	N	H	G	D	L	V	N	K	I	.	.	L	R	A	G	N	D	H	E	K
Template Known Secondary structure												T	T		B			S	S	S	S	.		S	S	B					S	.	.	.	.	.	.	.			S	S						S				T	T									S									.	.							S
Template Predicted Secondary structure																						.										.	.	.	.	.	.	.																																	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.								30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	E	A	V	A	I	G	H	M	T	A	G	G	T	V	D	E	P	I	S	R	H	P	T	K	R	T	H	M	A	V	H	P	M	G	K	P	A	V	T	H	Y	R	I	M	E	H	F	R	V	H	T	R	L	R	L	R	L	E	T	G	R	T	H	Q	I	R	V	H	M	A	H	I	T	H	P	L	V	G
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	L	V	T	V	D	K	P	I	T	E	E	F	I	R	G	X	S	A	G	V	P	I	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	T	K	K	C	K	V	K	K	E	A	P	F	V	F	R	I	T	L	V	Q	G	L	N	R	Q	I	R	R	X	C	E	H	F	G	Y	E	V	K	K
Template Known Secondary structure								S	S											S	S					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T										S	T	T									T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.														.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	R	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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