Job Description P33643 Confidence 97.51% Date Thu Jan 5 11:52:28 GMT 2012 Rank 27 Aligned Residues 88 % Identity 26% Template c2ey4A_ PDB info PDB header:isomerase/biosynthetic protein Chain: A: PDB Molecule:probable trna pseudouridine synthase b; PDBTitle: crystal structure of a cbf5-nop10-gar1 complex Resolution 2.11 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	A	R	F	E	P	Q	D	I	P	L	D	I	V	Y	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	I	I	I	I	N	K	P	R	D	L	V	V	H	P	G	A	G	N	P	D	G	T	V	L	N	A	L	L	H	Y	Y	P	P	I	A	D	V
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		E	V	R	R	I	L	P	A	D	I	K	R	E	V	L	I	K	D	E	N	A	E	T	N	P	D	W	G	F	P	P	E	K	R	P	I	E	M	H	I	Q	F	G	V	I	N	L	D	K	P	P	G	P	T	S	.	.	.	.	.	.	.	.	H	E	V	V	A	W	I	K	K	I	L	N	.	.	.	.	L
Template Known Secondary structure				T	T	S		G	G	G	S							S		T	T					T	T	S				G	G	G									T									S	S	S			.	.	.	.	.	.	.	.											T	T	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.	70	.	.	.	.					.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	A	G	I	V	H	R	L	D	K	D	T	T	G	L	M	V	V	A	K	T	V	P	A	Q	T	R	L	V	E	S	L	Q	R	R	E	I	T	R	E	Y	E	A	V	A	I
Query Conservation
Alig confidence																							.															.	.	.
Template Conservation																							.															.	.	.
Template Sequence		E	K	A	G	H	G	G	T	L	D	P	K	V	S	G	V	L	P	V	A	L	.	E	K	A	T	R	V	V	Q	A	L	L	P	A	G	.	.	.	K	E	Y	V	A	L	M	H
Template Known Secondary structure		S					S	S				T	T										.	G	G	G	G	G	G					T	T	S		.	.	.
Template Predicted Secondary structure																							.															.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions