Job Description P33643 Confidence 94.96% Date Thu Jan 5 11:52:28 GMT 2012 Rank 45 Aligned Residues 47 % Identity 17% Template c1ze2B_ PDB info PDB header:lyase/rna Chain: B: PDB Molecule:trna pseudouridine synthase b; PDBTitle: conformational change of pseudouridine 55 synthase upon its2 association with rna substrate Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	I	I	I	I	N	K	P	R	D	L	V	V	H	P	G	A	G	N	P	D	G	T	V	L	N	A	L	L	H	Y	Y	P	P	I	A	D	V	P	R	A	G	I	V	H	R	L	D	K	D	T	T	G	L	M	V	V	A
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		H	G	I	L	V	A	Y	K	P	K	G	P	T	S	.	.	.	.	.	.	.	.	H	D	V	V	D	E	V	R	K	K	L	K	.	.	.	.	T	R	K	V	G	H	G	G	T	L	D	P	F	A	C	G	V	L	I	I	G
Template Known Secondary structure											S	S	S			.	.	.	.	.	.	.	.											T	T	.	.	.	.		S					S	S				S	S			B
Template Predicted Secondary structure																.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.									.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions